RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 GCKP35557 465 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 ELK3P41970 407 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 ZNF143P52747 638 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 CDK16Q00536 496 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 PTPN11Q06124 597 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 KCNJ11Q14654 390 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 PLEKHG4Q58EX7 1191 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 DARS2Q6PI48 645 aaKnown RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 C4orf22Q6V702 233 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SH2D5Q6ZV89 423 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 PLPPR4Q7Z2D5 763 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 RIOX2Q8IUF8 465 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.66□□□□□ -0.22
USB1-207ENST00000563149 FAM71DQ8N9W8 422 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SPATA18Q8TC71 538 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 KLRG1Q96E93 195 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 BTBD10Q9BSF8 475 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 RPF1Q9H9Y2 349 aaKnown RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 KANSL3Q9P2N6 904 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SLC17A7Q9P2U7 560 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 NXF1Q9UBU9 619 aaKnown RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 ZNF180Q9UJW8 692 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 CHMP2BQ9UQN3 213 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 TNFSF13BQ9Y275 285 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 TRDMT1O14717 391 aaKnown RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 MICAL2O94851 1124 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 CD48P09326 243 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 P4HA1P13674 534 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 GMPSP49915 693 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 FSTL1Q12841 308 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 BLMHQ13867 455 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 LGSNQ5TDP6 509 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 TTC39BQ5VTQ0 682 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 LBX2Q6XYB7 198 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 ILDR2Q71H61 639 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 MAP7D3Q8IWC1 876 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 TTC39CQ8N584 583 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 RFWD2Q8NHY2 731 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 HSPH1Q92598 858 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 USP6NLQ92738 828 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 RTP4Q96DX8 246 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 NUDCD1Q96RS6 583 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 MPHOSPH6Q99547 160 aaKnown RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 ADPGKQ9BRR6 497 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 CNPY3Q9BT09 278 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 C10orf88Q9H8K7 445 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 CNTN3Q9P232 1028 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 HEY2Q9UBP5 337 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 NKX1-2Q9UD57 310 aaPredicted RBP13.66□□□□□ -0.22
USB1-207ENST00000563149 TJP2Q9UDY2 1190 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 PCSK1NQ9UHG2 260 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 KIAA1257Q9ULG3 409 aa13.66□□□□□ -0.22
USB1-207ENST00000563149 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.66□□□□□ -0.22
USB1-207ENST00000563149 TCRBV9S1A1TA0A576 114 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 WDR91A4D1P6 747 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 KBTBD13C9JR72 458 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 CILPO75339 1184 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 ATP5BP06576 529 aaKnown RBP13.65□□□□□ -0.22
USB1-207ENST00000563149 GPD1P21695 349 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 GPD2P43304 727 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 TNFAIP2Q03169 654 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 CDK18Q07002 472 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 PDK2Q15119 407 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 SLC26A11Q86WA9 606 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 EMC1Q8N766 993 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 SKA1Q96BD8 255 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 LRRC39Q96DD0 335 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 PTCD3Q96EY7 689 aaKnown RBP13.65□□□□□ -0.22
USB1-207ENST00000563149 CALN1Q9BXU9 219 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 MMADHCQ9H3L0 296 aaPredicted RBP13.65□□□□□ -0.22
USB1-207ENST00000563149 MKS1Q9NXB0 559 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 PPP2R3BQ9Y5P8 575 aa13.65□□□□□ -0.22
USB1-207ENST00000563149 ANK1P16157 1881 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 SOWAHBA6NEL2 793 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 KRT19P08727 400 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 SNRPAP09012 282 aaKnown RBP13.64□□□□□ -0.23
USB1-207ENST00000563149 TGM2P21980 687 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 MAGEA6P43360 314 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 SLC26A2P50443 739 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 CDH6P55285 790 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 FAAP100Q0VG06 881 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 KBTBD12Q3ZCT8 623 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 C4orf50Q6ZRC1 276 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.64□□□□□ -0.23
USB1-207ENST00000563149 FAF2Q96CS3 445 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 SERAC1Q96JX3 654 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 RNF157Q96PX1 679 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 NFKBIZQ9BYH8 718 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 ADAM33Q9BZ11 813 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
USB1-207ENST00000563149 SDCBP2Q9H190 292 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 CDT1Q9H211 546 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 DENND2DQ9H6A0 471 aaPredicted RBP13.64□□□□□ -0.23
USB1-207ENST00000563149 KCNK13Q9HB14 408 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 STOML1Q9UBI4 398 aa13.64□□□□□ -0.23
USB1-207ENST00000563149 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms