RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 JAKMIP2Q96AA8 810 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 TMEM176AQ96HP8 235 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 KREMEN1Q96MU8 473 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 KCNK16Q96T55 309 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 INTS2Q9H0H0 1204 aaKnown RBP6.57□□□□□ -1.36
CNOT1-204ENST00000563130 GCNT4Q9P109 453 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 CNTN6Q9UQ52 1028 aa6.57□□□□□ -1.36
CNOT1-204ENST00000563130 A0A1W2PRU2 124 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SLC38A8A6NNN8 435 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 DLL1O00548 723 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 TNFRSF10BO14763 440 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FGF19O95750 216 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 F12P00748 615 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CCDC130P13994 396 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CEBPBP17676 345 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 PON1P27169 355 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 KCNMA1Q12791 1236 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 MTMR3Q13615 1198 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 IQCB1Q15051 598 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 KRT31Q15323 416 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 EXOC3L4Q17RC7 722 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ARHGAP17Q68EM7 881 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GBP6Q6ZN66 633 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 DENND5BQ6ZUT9 1274 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 DHX40Q8IX18 779 aaKnown RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 PPM1KQ8N3J5 372 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GIPC2Q8TF65 315 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 NXPE3Q969Y0 559 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CYFIP2Q96F07 1278 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SMARCD1Q96GM5 515 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SMOQ99835 787 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CRACR2AQ9BSW2 395 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 TTLL2Q9BWV7 592 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 NAT10Q9H0A0 1025 aaKnown RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 KCNK12Q9HB15 430 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SIX2Q9NPC8 291 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 IL37Q9NZH6 218 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 IGSF9Q9P2J2 1179 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 BDP1A6H8Y1 2624 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FAM92AA1XBS5 289 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SOBPA7XYQ1 873 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 PI4K2BG5E9Z4 385 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 RNF225M0QZC1 329 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 TADA3O75528 432 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 BEST1O76090 585 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 MYL4P12829 197 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GJA1P17302 382 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GABRR2P28476 465 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 WEE1P30291 646 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CDC25CP30307 473 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GRIK1P39086 918 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF165P49910 485 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ZNF132P52740 706 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 YWHAEP62258 255 aaKnown RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 APBA1Q02410 837 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 HTR4Q13639 388 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 TEAD2Q15562 447 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 NFKBIBQ15653 356 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 PTPN21Q16825 1174 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ZSCAN23Q3MJ62 389 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 PPP1R26Q5T8A7 1209 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CLEC20AQ6ZU45 233 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 RRAGAQ7L523 313 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ENOSF1Q7L5Y1 443 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SCN4BQ8IWT1 228 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 STKLD1Q8NE28 680 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ING5Q8WYH8 240 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FGF14Q92915 247 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FAM81BQ96LP2 452 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ZSWIM3Q96MP5 696 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ASB16Q96NS5 453 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 GPR88Q9GZN0 384 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 TRPV4Q9HBA0 871 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 DMAP1Q9NPF5 467 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 KRT82Q9NSB4 513 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 FAM49BQ9NUQ9 324 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 APEX2Q9UBZ4 518 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 LIMA1Q9UHB6 759 aaKnown RBP6.56□□□□□ -1.36
CNOT1-204ENST00000563130 MUTYHQ9UIF7 546 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 SORCS3Q9UPU3 1222 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 CUL9Q8IWT3 2517 aa6.56□□□□□ -1.36
CNOT1-204ENST00000563130 ATP8B3O60423 1300 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 GREB1Q4ZG55 1949 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 HHLA1C9JL84 531 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 DCXO43602 365 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ASGR2P07307 311 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 PAEPP09466 180 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TRIM21P19474 475 aaKnown RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 FCARP24071 287 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 STXBP5Q5T5C0 1151 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 TMEM270Q6UE05 265 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 PARM1Q6UWI2 310 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 AOPEPQ8N6M6 819 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 MCRS1Q96EZ8 462 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 HEXIM2Q96MH2 286 aaKnown RBP6.55□□□□□ -1.36
CNOT1-204ENST00000563130 ZSWIM1Q9BR11 485 aa6.55□□□□□ -1.36
CNOT1-204ENST00000563130 RPP25Q9BUL9 199 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms