RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 MMEP08473 750 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 CHRNB2P17787 502 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 YWHAQP27348 245 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 SSTR3P32745 418 aaPredicted RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 CDH5P33151 784 aaPredicted RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 PPP3CCP48454 512 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 MRE11P49959 708 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 KIF11P52732 1056 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 KLHL30Q0D2K2 578 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 SMAD4Q13485 552 aaKnown RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 MTMR3Q13615 1198 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 GSE1Q14687 1217 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 CLUL1Q15846 466 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 TSR1Q2NL82 804 aaKnown RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 PABPC1LQ4VXU2 614 aaKnown RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 PMF1Q6P1K2 205 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 TMEM35BQ8NCS4 154 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 SCAMP5Q8TAC9 235 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.45□□□□□ -0.26
CDH11-205ENST00000562882 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 SLC20A1Q8WUM9 679 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 AGPAT1Q99943 283 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 PDCL3Q9H2J4 239 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 HAUS4Q9H6D7 363 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 HCFC1R1Q9NWW0 138 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 IMPACTQ9P2X3 320 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 USP3Q9Y6I4 520 aa13.45□□□□□ -0.26
CDH11-205ENST00000562882 TULP2O00295 520 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 MBTPS2O43462 519 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 MFAP3LO75121 409 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 SERPING1P05155 500 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 ACADSBP45954 432 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 SLC5A3P53794 718 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 ADKP55263 362 aaKnown RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 SNX16P57768 344 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 USP46P62068 366 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 FMO1Q01740 532 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 CBX2Q14781 532 aaPredicted RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 AAK1Q2M2I8 961 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 E4F1Q66K89 784 aaPredicted RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 HGSNATQ68CP4 663 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 PM20D1Q6GTS8 502 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 TRIM72Q6ZMU5 477 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 PDZD4Q76G19 769 aaPredicted RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 TMEM110Q86TL2 294 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 TMC8Q8IU68 726 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 HS6ST3Q8IZP7 471 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 OVCA2Q8WZ82 227 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 NOX5Q96PH1 765 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 SLC4A5Q9BY07 1137 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 PRDM6Q9NQX0 595 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 ABHD10Q9NUJ1 306 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 ZNHIT6Q9NWK9 470 aaKnown RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 MAGED2Q9UNF1 606 aaPredicted RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 FAM50BQ9Y247 325 aa13.44□□□□□ -0.26
CDH11-205ENST00000562882 USP15Q9Y4E8 981 aaPredicted RBP13.44□□□□□ -0.26
CDH11-205ENST00000562882 GRXCR2A6NFK2 248 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 SOBPA7XYQ1 873 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 GABBR2O75899 941 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 F11P03951 625 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 CYP1A1P04798 512 aaPredicted RBP13.43□□□□□ -0.26
CDH11-205ENST00000562882 SKILP12757 684 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 TNFAIP3P21580 790 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 CDC25CP30307 473 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 TKTL1P51854 596 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 TAF10Q12962 218 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 SMAD2Q15796 467 aaKnown RBP13.43□□□□□ -0.26
CDH11-205ENST00000562882 PRSS36Q5K4E3 855 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 SNX30Q5VWJ9 437 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 WDR59Q6PJI9 974 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 GAREM2Q75VX8 874 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 GPRIN1Q7Z2K8 1008 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 CCDC186Q7Z3E2 898 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 ZNF571Q7Z3V5 609 aaPredicted RBP13.43□□□□□ -0.26
CDH11-205ENST00000562882 PASD1Q8IV76 773 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 SCML4Q8N228 414 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 TC2NQ8N9U0 490 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 STKLD1Q8NE28 680 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 ATXN2LQ8WWM7 1075 aaKnown RBP13.43□□□□□ -0.26
CDH11-205ENST00000562882 PPP1R13BQ96KQ4 1090 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 SLITRK1Q96PX8 696 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 IL21Q9HBE4 155 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 LRRC4Q9HBW1 653 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 ZNF334Q9HCZ1 680 aaPredicted RBP13.43□□□□□ -0.26
CDH11-205ENST00000562882 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.43□□□□□ -0.26
CDH11-205ENST00000562882 THEGQ9P2T0 379 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
CDH11-205ENST00000562882 NCANO14594 1321 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 CLUHO75153 1309 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 MYH10P35580 1976 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 FBXO21O94952 628 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 ZBED1O96006 694 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 MYL4P12829 197 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 UNGP13051 313 aaPredicted RBP13.42□□□□□ -0.26
CDH11-205ENST00000562882 FSHRP23945 695 aa13.42□□□□□ -0.26
CDH11-205ENST00000562882 GABRR2P28476 465 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms