RNA–Protein interactions for RNA: ENST00000562875.5

KARS-203, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 3

Gene KARS, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-203ENST00000562875 RPUSD2Q8IZ73 545 aaKnown RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 ZNF513Q8N8E2 541 aaPredicted RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 BBOF1Q8ND07 529 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 ST13P5Q8NFI4 369 aaPredicted RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 TMEM174Q8WUU8 243 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 MAGOHBQ96A72 148 aaKnown RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 CYFIP2Q96F07 1278 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 BORCS6Q96GS4 357 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 TCTN2Q96GX1 697 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 CCDC114Q96M63 670 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 SELENOSQ9BQE4 189 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 MXRA8Q9BRK3 442 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 TACO1Q9BSH4 297 aaKnown RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 PABPC3Q9H361 631 aaKnown RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 RABEP2Q9H5N1 569 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 PIF1Q9H611 641 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 VCPKMTQ9H867 229 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 UBE2TQ9NPD8 197 aaPredicted RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 TBC1D22BQ9NU19 505 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 CNOT7Q9UIV1 285 aaKnown RBP8.49□□□□□ -1.05
KARS-203ENST00000562875 TMX2Q9Y320 296 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 SIP14410 1827 aa8.49□□□□□ -1.05
KARS-203ENST00000562875 H0Y8X5 98 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 TRAPPC3O43617 180 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 MTA2O94776 668 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 FTLP02792 175 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 TRIM49P0CI25 452 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 TRIM49CP0CI26 452 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 GHRP10912 638 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 CTNNA2P26232 953 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 FNTAP49354 379 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 JAK3P52333 1124 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 RWDD2BP57060 319 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 MAGOHP61326 146 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 ZC2HC1CQ53FD0 456 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 CCDC137Q6PK04 289 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 CRTC3Q6UUV7 619 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ZNF574Q6ZN55 896 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 KRT27Q7Z3Y8 459 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 DDX42Q86XP3 938 aaKnown RBP eCLIP8.48□□□□□ -1.05
KARS-203ENST00000562875 COL23A1Q86Y22 540 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 JAMLQ86YT9 394 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ZFPM1Q8IX07 1006 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 CCDC105Q8IYK2 499 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 PRPF38AQ8NAV1 312 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 CCDC197Q8NCU1 140 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 FAM151AQ8WW52 585 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 DYDC1Q8WWB3 177 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ZNF653Q96CK0 615 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 HOOK2Q96ED9 719 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 CHMP6Q96FZ7 201 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 PGM2Q96G03 612 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 RCC1LQ96I51 464 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 NT5C1BQ96P26 610 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ZSWIM1Q9BR11 485 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 PLCD4Q9BRC7 762 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 TRIM51Q9BSJ1 452 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ROPN1BQ9BZX4 212 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 TRIM31Q9BZY9 425 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 THAP2Q9H0W7 228 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 UNC45AQ9H3U1 944 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 ST6GALNAC4Q9H4F1 302 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 TDRD3Q9H7E2 651 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 ROPN1Q9HAT0 212 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 HOMER3Q9NSC5 361 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 CGGBP1Q9UFW8 167 aaPredicted RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 PCYOX1Q9UHG3 505 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 CCPG1Q9ULG6 757 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 AKT3Q9Y243 479 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 SF3B6Q9Y3B4 125 aaKnown RBP8.48□□□□□ -1.05
KARS-203ENST00000562875 DOCK1Q14185 1865 aa8.48□□□□□ -1.05
KARS-203ENST00000562875 PARP14Q460N5 1801 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 TMEM110-MUSTN1A8MSY1 372 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 H0YGN5 161 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 MYO1FO00160 1098 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 NOP56O00567 594 aaKnown RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 ZC3H11AO75152 810 aaKnown RBP eCLIP8.47□□□□□ -1.05
KARS-203ENST00000562875 GAS8O95995 478 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ESR1P03372 595 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 GSNP06396 782 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 MYBL1P10243 752 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CD8BP10966 210 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 SCP2P22307 547 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ECHS1P30084 290 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 GTF2H1P32780 548 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CTSKP43235 329 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 QARSP47897 775 aaKnown RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 BPIFB4P59827 614 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 ACTN3Q08043 901 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 IFT88Q13099 833 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 DMP1Q13316 513 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 ITIH4Q14624 930 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 MESDQ14696 234 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 DLGAP5Q15398 846 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 UAP1Q16222 522 aaPredicted RBP8.47□□□□□ -1.05
KARS-203ENST00000562875 PTPROQ16827 1216 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CBWD6Q4V339 395 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 EPC2Q52LR7 807 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CBWD3Q5JTY5 395 aa8.47□□□□□ -1.05
KARS-203ENST00000562875 CBWD5Q5RIA9 395 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms