RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
CMTM3-205ENST00000562707 SPACA7Q96KW9 195 aa17.66■□□□□ 0.42
CMTM3-205ENST00000562707 USP28Q96RU2 1077 aa17.66■□□□□ 0.42
CMTM3-205ENST00000562707 ELOVL4Q9GZR5 314 aa17.66■□□□□ 0.42
CMTM3-205ENST00000562707 TNMDQ9H2S6 317 aa17.66■□□□□ 0.42
CMTM3-205ENST00000562707 TBC1D14Q9P2M4 693 aa17.66■□□□□ 0.42
CMTM3-205ENST00000562707 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 PATE3B3GLJ2 98 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 GIPC1O14908 333 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 EIF3DO15371 548 aaKnown RBP eCLIP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 KAT7O95251 611 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 KLF8O95600 359 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 OAS1P00973 400 aaKnown RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 CEACAM1P13688 526 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 CSRP1P21291 193 aaKnown RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 TIE1P35590 1138 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 IRX4P78413 519 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 IFRD2Q12894 506 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 FOXC1Q12948 553 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 SNRNP35Q16560 246 aaKnown RBP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 WDR72Q3MJ13 1102 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 RHBDF2Q6PJF5 856 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 TMEM92Q6UXU6 159 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 NUP93Q8N1F7 819 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 GLIS3Q8NEA6 775 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 PDZD8Q8NEN9 1154 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 OLIG1Q8TAK6 271 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 WHAMMQ8TF30 809 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 HPS3Q969F9 1004 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 ARHGEF4Q9NR80 690 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
CMTM3-205ENST00000562707 CHD8Q9HCK8 2581 aa17.65■□□□□ 0.42
CMTM3-205ENST00000562707 GREB1Q4ZG55 1949 aa17.64■□□□□ 0.42
CMTM3-205ENST00000562707 ANTXRLA6NF34 631 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 A8MXQ7 604 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 CDX4O14627 284 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 SCAMP3O14828 347 aaKnown RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 RTN3O95197 1032 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 ADH5P11766 374 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 YWHAQP27348 245 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 P2RY2P41231 377 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 GRIA2P42262 883 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 TNFRSF4P43489 277 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 LMAN2Q12907 356 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 TRPC3Q13507 836 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 PSMD6Q15008 389 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 UAP1L1Q3KQV9 507 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 PGBD3Q8N328 593 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 IL17RCQ8NAC3 791 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 ZNF507Q8TCN5 953 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 RLN3Q8WXF3 142 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 CCDC127Q96BQ5 260 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 CGRRF1Q99675 332 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 NUSAP1Q9BXS6 441 aaKnown RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 ZNF518BQ9C0D4 1074 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 CUEDC2Q9H467 287 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 ZSCAN16Q9H4T2 348 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 EVLQ9UI08 416 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-205ENST00000562707 TCHHQ07283 1943 aa17.64■□□□□ 0.41
CMTM3-205ENST00000562707 A0A0A0MRY4 1105 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 E2F8A0AVK6 867 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 SGK1O00141 431 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 TNFRSF10BO14763 440 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 HOXD13P35453 343 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 DPP6P42658 865 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 CYP2J2P51589 502 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 CACNA2D1P54289 1103 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 SNRPFP62306 86 aaKnown RBP17.63■□□□□ 0.41
CMTM3-205ENST00000562707 ASIC1P78348 528 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 GAD2Q05329 585 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 STK38Q15208 465 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 PREPLQ4J6C6 727 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-205ENST00000562707 EMC10Q5UCC4 262 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 BTBD8Q5XKL5 378 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 UNQ6494/PRO21346Q6UXR6 183 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 NUDT18Q6ZVK8 323 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 OVCA2Q8WZ82 227 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 FBXO32Q969P5 355 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 OTUB2Q96DC9 234 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 TRIM9Q9C026 710 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 AGPAT3Q9NRZ7 376 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 KBTBD4Q9NVX7 518 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 NXF1Q9UBU9 619 aaKnown RBP17.63■□□□□ 0.41
CMTM3-205ENST00000562707 NME7Q9Y5B8 376 aa17.63■□□□□ 0.41
CMTM3-205ENST00000562707 MAP1BP46821 2468 aaKnown RBP17.63■□□□□ 0.41
CMTM3-205ENST00000562707 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 TBC1D3BA6NDS4 549 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 CLDN5O00501 218 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 CLIC2O15247 247 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 PHACTR2O75167 634 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 HNRNPLP14866 589 aaKnown RBP eCLIP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 ATICP31939 592 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 KIR2DL1P43626 348 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-205ENST00000562707 KDSRQ06136 332 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 CYP24A1Q07973 514 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 MESP2Q0VG99 397 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 TRIM61Q5EBN2 209 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 FAM26FQ5R3K3 315 aa17.62■□□□□ 0.41
CMTM3-205ENST00000562707 LY6G5CQ5SRR4 150 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms