RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 BDNFP23560 247 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 CTNNA1P35221 906 aaKnown RBP14.64□□□□□ -0.07
CLK3-209ENST00000562670 CACNA2D1P54289 1103 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 RPL7AP62424 266 aaKnown RBP14.64□□□□□ -0.07
CLK3-209ENST00000562670 KRT17Q04695 432 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 ZNF252P-AS1Q0IIN9 211 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 ADIGQ0VDE8 80 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 MESDQ14696 234 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 RPS6KA1Q15418 735 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 WHAMMP3Q1A5X7 153 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 EFHC1Q5JVL4 640 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 LRRC38Q5VT99 294 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 TPGS2Q68CL5 300 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 OR6B2Q6IFH4 312 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 KIAA1841Q6NSI8 718 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 BEND5Q7L4P6 421 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 TAS1R1Q7RTX1 841 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 SIX6OS1Q8N1H7 587 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 FBXO22Q8NEZ5 403 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 RIN2Q8WYP3 895 aaPredicted RBP14.64□□□□□ -0.07
CLK3-209ENST00000562670 OSBPL9Q96SU4 736 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 TRIM62Q9BVG3 475 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 TRIM7Q9C029 511 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 CARD9Q9H257 536 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 FNIP2Q9P278 1114 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 RNF14Q9UBS8 474 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 USP3Q9Y6I4 520 aa14.64□□□□□ -0.07
CLK3-209ENST00000562670 FAM170AA1A519 330 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 CCDC85CA6NKD9 419 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 GOLGA8SH3BPF8 625 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 TNFRSF10BO14763 440 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 PSTPIP1O43586 416 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 SPOPO43791 374 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 DAB1O75553 588 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 FGF18O76093 207 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 URI1O94763 535 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 CPB1P15086 417 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 RFC1P35251 1148 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 MAGEA10P43363 369 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 PTPN9P43378 593 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 ZNF143P52747 638 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 DAOAP59103 153 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 MRPS5P82675 430 aaKnown RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 ROR1Q01973 937 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 UBE3AQ05086 875 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 PM20D1Q6GTS8 502 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 RSPO2Q6UXX9 243 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 UBL4BQ8N7F7 174 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 KHSRPQ92945 711 aaKnown RBP eCLIP14.63□□□□□ -0.07
CLK3-209ENST00000562670 PIWIL1Q96J94 861 aaKnown RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 PBKQ96KB5 322 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 SPATA17Q96L03 361 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 B3GALT6Q96L58 329 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 SAMD11Q96NU1 681 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 CNPY3Q9BT09 278 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 ZBP1Q9H171 429 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 GOLPH3Q9H4A6 298 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 RXFP1Q9HBX9 757 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 COMMD8Q9NX08 183 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 ABI2Q9NYB9 513 aaPredicted RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 PCDH10Q9P2E7 1040 aa14.63□□□□□ -0.07
CLK3-209ENST00000562670 AFF4Q9UHB7 1163 aaKnown RBP14.63□□□□□ -0.07
CLK3-209ENST00000562670 F8VP50 259 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 DDX3YO15523 660 aaKnown RBP14.62□□□□□ -0.07
CLK3-209ENST00000562670 LILRB3O75022 631 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 RB1P06400 928 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 OR4Q2P0C623 313 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 CTSAP10619 480 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 DESP17661 470 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 GPD1P21695 349 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 PCK1P35558 622 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 BMPR1AP36894 532 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 PLXNA3P51805 1871 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 TKTL1P51854 596 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 OGDHQ02218 1023 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 PRSS55Q6UWB4 352 aaPredicted RBP14.62□□□□□ -0.07
CLK3-209ENST00000562670 ZNF572Q7Z3I7 529 aaPredicted RBP14.62□□□□□ -0.07
CLK3-209ENST00000562670 POLNQ7Z5Q5 900 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 SCUBE3Q8IX30 993 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 JOSD2Q8TAC2 188 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 BTBD6Q96KE9 485 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 RNPC3Q96LT9 517 aaKnown RBP14.62□□□□□ -0.07
CLK3-209ENST00000562670 SLC2A13Q96QE2 648 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 KCNK16Q96T55 309 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 CLSTN3Q9BQT9 956 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 C11orf84Q9BUA3 381 aaPredicted RBP14.62□□□□□ -0.07
CLK3-209ENST00000562670 RHOBTB2Q9BYZ6 727 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 IL37Q9NZH6 218 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 PCDHA3Q9Y5H8 950 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 IRAK3Q9Y616 596 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 CDY1Q9Y6F8 540 aa14.62□□□□□ -0.07
CLK3-209ENST00000562670 FAM92AA1XBS5 289 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 WDR27A2RRH5 827 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 LINC01553A4QN01 128 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 NCK2O43639 380 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 ABLIM3O94929 683 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 GJB6O95452 261 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 VNN2O95498 520 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 ZBED1O96006 694 aa14.61□□□□□ -0.07
CLK3-209ENST00000562670 C1RP00736 705 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms