RNA–Protein interactions for RNA: ENST00000562610.5

COMMD4-206, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-206ENST00000562610 THG1LQ9NWX6 298 aaKnown RBP17.08■□□□□ 0.32
COMMD4-206ENST00000562610 GCNT4Q9P109 453 aa17.08■□□□□ 0.32
COMMD4-206ENST00000562610 KANSL1LA0AUZ9 987 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 PI15O43692 258 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 CD72P21854 359 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 PPP3CCP48454 512 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 STARD6P59095 220 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 FAM114A1Q8IWE2 563 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 PJA1Q8NG27 643 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 CSNK1G1Q9HCP0 422 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
COMMD4-206ENST00000562610 ZNF840PA6NDX5 716 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 TNFRSF10BO14763 440 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 CD19P15391 556 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 HDCP19113 662 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 ERCC5P28715 1186 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-206ENST00000562610 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 ZNF268Q14587 947 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-206ENST00000562610 CC2D1AQ6P1N0 951 aaPredicted RBP17.06■□□□□ 0.32
COMMD4-206ENST00000562610 GPRIN1Q7Z2K8 1008 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 ARHGEF19Q8IW93 802 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 TTC8Q8TAM2 541 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 OVCA2Q8WZ82 227 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 PRRX2Q99811 253 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 INTS2Q9H0H0 1204 aaKnown RBP17.06■□□□□ 0.32
COMMD4-206ENST00000562610 THAP9Q9H5L6 903 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 TRPV5Q9NQA5 729 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 GMIPQ9P107 970 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 SIT1Q9Y3P8 196 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 PCDHB4Q9Y5E5 795 aa17.06■□□□□ 0.32
COMMD4-206ENST00000562610 ARNTLO00327 626 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 DCNP07585 359 aaKnown RBP17.05■□□□□ 0.32
COMMD4-206ENST00000562610 KPNA1P52294 538 aaPredicted RBP17.05■□□□□ 0.32
COMMD4-206ENST00000562610 USP4Q13107 963 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 MTF1Q14872 753 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 GOLGA7BQ2TAP0 167 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 SGO2Q562F6 1265 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 CCDC183Q5T5S1 534 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 TMEM270Q6UE05 265 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 ZNF852Q6ZMS4 543 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 RRAGAQ7L523 313 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 UBR7Q8N806 425 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 EHBP1Q8NDI1 1231 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 PRSS33Q8NF86 280 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 LMO3Q8TAP4 145 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 RIN3Q8TB24 985 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 KAT5Q92993 513 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 DDX23Q9BUQ8 820 aaKnown RBP17.05■□□□□ 0.32
COMMD4-206ENST00000562610 DUSP16Q9BY84 665 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 KCNH6Q9H252 994 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 FBXO44Q9H4M3 255 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 COMMD8Q9NX08 183 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 NDRG2Q9UN36 371 aaKnown RBP17.05■□□□□ 0.32
COMMD4-206ENST00000562610 MUC6Q6W4X9 2439 aa17.05■□□□□ 0.32
COMMD4-206ENST00000562610 WDFY4Q6ZS81 3184 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 OAS1P00973 400 aaKnown RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 MBL2P11226 248 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 PFKLP17858 780 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 ACO1P21399 889 aaKnown RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 SOX9P48436 509 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 SLC8A3P57103 927 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 TNK2Q07912 1038 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 ZNF77Q15935 545 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 ARHGAP17Q68EM7 881 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 TRIM68Q6AZZ1 485 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 SASS6Q6UVJ0 657 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 RBM43Q6ZSC3 357 aaKnown RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 IRF2BP1Q8IU81 584 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 CCDC105Q8IYK2 499 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 SH3RF2Q8TEC5 729 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 PNPLA8Q9NP80 782 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 CHORDC1Q9UHD1 332 aaPredicted RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 TSPAN16Q9UKR8 245 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
COMMD4-206ENST00000562610 MRPS17Q9Y2R5 130 aaKnown RBP17.04■□□□□ 0.32
COMMD4-206ENST00000562610 MYOFQ9NZM1 2061 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 KIAA1549LQ6ZVL6 1849 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 FAM170BA6NMN3 283 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 HHLA1C9JL84 531 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 MAN2B1O00754 1011 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 CYP26A1O43174 497 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 TARSP26639 723 aaKnown RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 IFNAR2P48551 515 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 NUBP1P53384 320 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 GCNT1Q02742 428 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 STX1AQ16623 288 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 MAN2A1Q16706 1144 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 GBP6Q6ZN66 633 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 RBBP8NLQ8NC74 664 aaPredicted RBP17.03■□□□□ 0.32
COMMD4-206ENST00000562610 NACA2Q9H009 215 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 EBF3Q9H4W6 596 aa17.03■□□□□ 0.32
COMMD4-206ENST00000562610 TLR8Q9NR97 1041 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms