RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ARHGAP44Q17R89 818 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 GOLGA7BQ2TAP0 167 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 LCLAT1Q6UWP7 414 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 MON1AQ86VX9 555 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 TTC30AQ86WT1 665 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 SLC44A3Q8N4M1 653 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 PDZD8Q8NEN9 1154 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 SCAMP5Q8TAC9 235 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 TFAP2BQ92481 460 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 FBXO32Q969P5 355 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 KXD1Q9BQD3 176 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
CLK3-207ENST00000562389 SLC46A2Q9BY10 475 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 UBXN6Q9BZV1 441 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 FBXO44Q9H4M3 255 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 ZFP14Q9HCL3 533 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 TRPM5Q9NZQ8 1165 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 HESX1Q9UBX0 185 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 A0A0C4DFX4 3053 aa17.67■□□□□ 0.42
CLK3-207ENST00000562389 PFKLP17858 780 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 BRD2P25440 801 aaKnown RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 BST2Q10589 180 aaKnown RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 IFRD2Q12894 506 aaPredicted RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 CNGA2Q16280 664 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 PKDCCQ504Y2 493 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 TXNDC8Q6A555 127 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 TANGO2Q6ICL3 276 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 GPRIN1Q7Z2K8 1008 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 ARID3BQ8IVW6 561 aaPredicted RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 CMTM8Q8IZV2 173 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 MAB21L3Q8N8X9 362 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 ST13P5Q8NFI4 369 aaPredicted RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 EDAQ92838 391 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 E2F7Q96AV8 911 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 ZSWIM1Q9BR11 485 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 NAA15Q9BXJ9 866 aaKnown RBP17.66■□□□□ 0.42
CLK3-207ENST00000562389 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLK3-207ENST00000562389 SIK3Q9Y2K2 1263 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 DAAM1Q9Y4D1 1078 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 FHOD1Q9Y613 1164 aa17.66■□□□□ 0.42
CLK3-207ENST00000562389 KIF26AQ9ULI4 1882 aaPredicted RBP17.65■□□□□ 0.42
CLK3-207ENST00000562389 ZNF840PA6NDX5 716 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 XPO1O14980 1071 aaKnown RBP17.65■□□□□ 0.42
CLK3-207ENST00000562389 SETSIPP0DME0 302 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 SRFP11831 508 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 UCHL3P15374 230 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 TPM4P67936 248 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 UBXN1Q04323 297 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 SNX30Q5VWJ9 437 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 LUZP1Q86V48 1076 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 ERGIC2Q96RQ1 377 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 PLA2G2FQ9BZM2 168 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 GANQ9H2C0 597 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 SMOC2Q9H3U7 446 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 EPHX3Q9H6B9 360 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 OBP2AQ9NY56 170 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 SCML2Q9UQR0 700 aa17.65■□□□□ 0.42
CLK3-207ENST00000562389 NARSO43776 548 aaKnown RBP17.64■□□□□ 0.41
CLK3-207ENST00000562389 CALCAP01258 141 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 ZDHHC11BP0C7U3 371 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 GNA15P30679 374 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 AVPR1AP37288 418 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 VIPR2P41587 438 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 PLA2G4AP47712 749 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 KLK7P49862 253 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 PDE6CP51160 858 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 KIF11P52732 1056 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 PDE4CQ08493 712 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 SIGLEC14Q08ET2 396 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 SYCP1Q15431 976 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 MEA1Q16626 185 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 RAB41Q5JT25 222 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 LRSAM1Q6UWE0 723 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 VITQ6UXI7 678 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 DEPDC1BQ8WUY9 529 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 KIF9Q9HAQ2 790 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 TRPC7Q9HCX4 862 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 SLC2A4RGQ9NR83 387 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 USP3Q9Y6I4 520 aa17.64■□□□□ 0.41
CLK3-207ENST00000562389 TRAV19A0A0A6YYK7 116 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 C2orf78A6NCI8 922 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 HEPACAM2A8MVW5 462 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 M0QYV0 167 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 FOXN3O00409 490 aaPredicted RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 MED7O43513 233 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 PRAMEF12O95522 483 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 OAS1P00973 400 aaKnown RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 USP17L7P0C7H9 530 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 PSMC3P17980 439 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 USP8P40818 1118 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 TUBP50607 506 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 RAPGEF1Q13905 1077 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 ZNF268Q14587 947 aaPredicted RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 DRAP1Q14919 205 aaPredicted RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 CCDC186Q7Z3E2 898 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 MFSD6LQ8IWD5 586 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 FAM71AQ8IYT1 594 aa17.63■□□□□ 0.41
CLK3-207ENST00000562389 CELF5Q8N6W0 485 aaKnown RBP17.63■□□□□ 0.41
CLK3-207ENST00000562389 UBA3Q8TBC4 463 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms