RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 STAU1O95793 577 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CYP17A1P05093 508 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FAM163BP0C2L3 166 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PPP3CCP48454 512 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CASP4P49662 377 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SEC13P55735 322 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 CUL4BQ13620 913 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FOXD4L6Q3SYB3 417 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FOXD4L3Q6VB84 417 aaPredicted RBP17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 C12orf56Q8IXR9 622 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 B3GALNT2Q8NCR0 500 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 USP33Q8TEY7 942 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 B3GNT5Q9BYG0 378 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 A8MXQ7 604 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ABL1P00519 1130 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 MESP2Q0VG99 397 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 IFRD2Q12894 506 aaPredicted RBP17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TRPC3Q13507 836 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 C2orf27AQ580R0 203 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TDRD10Q5VZ19 366 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 IL31Q6EBC2 164 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TCEAL6Q6IPX3 200 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SFTPA1Q8IWL2 248 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ADGRG2Q8IZP9 1017 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 KIAA1958Q8N8K9 716 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 DDX1Q92499 740 aaKnown RBP17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 TCEAL3Q969E4 200 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 SMYD3Q9H7B4 428 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 PCDHA7Q9UN72 937 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 FRYQ5TBA9 3013 aa17.77■□□□□ 0.44
VPS9D1-AS1-201ENST00000562298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PVALEFA0A1B0GWK0 134 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CHRM1P11229 460 aaPredicted RBP17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KCNA4P22459 653 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ATICP31939 592 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 AFMP43652 599 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DGKEP52429 567 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CDH8P55286 799 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 DHCR24Q15392 516 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KNOP1Q1ED39 458 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 STPG1Q5TH74 334 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RASSF3Q86WH2 238 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SYAP1Q96A49 352 aaPredicted RBP17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ELMO3Q96BJ8 720 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SLITRK1Q96PX8 696 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KCNK16Q96T55 309 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TPSD1Q9BZJ3 242 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 VRTNQ9H8Y1 702 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 VPS45Q9NRW7 570 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CFAP97Q9P2B7 532 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CGNQ9P2M7 1197 aaKnown RBP17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 INVSQ9Y283 1065 aa17.76■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 EXOC3O60645 756 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SLC6A11P48066 632 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ELF2Q15723 593 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RESP18Q5W5W9 173 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PAQR9Q6ZVX9 377 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 C12orf40Q86WS4 652 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 NUP93Q8N1F7 819 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CCDC33Q8N5R6 958 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CCDC26Q8TAB7 109 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZFRQ96KR1 1074 aaKnown RBP17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 MMP17Q9ULZ9 603 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 EPG5Q9HCE0 2579 aa17.75■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 LRRIQ3A6PVS8 624 aaPredicted RBP17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 TNFRSF10BO14763 440 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 COCHO43405 550 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KLRC4O43908 158 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PHACTR2O75167 634 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RHOBTB1O94844 696 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 F13A1P00488 732 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZSCAN22P10073 491 aaPredicted RBP17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 MBL2P11226 248 aaPredicted RBP17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 HNRNPLP14866 589 aaKnown RBP eCLIP17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 YWHAQP27348 245 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ME1P48163 572 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CLDN10P78369 228 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CREB5Q02930 508 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ZNF699Q32M78 642 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 ANO7Q6IWH7 933 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RHBDF2Q6PJF5 856 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 FAM35AQ86V20 835 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KIAA0895Q8NCT3 520 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 MDGA1Q8NFP4 955 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SCAMP5Q8TAC9 235 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 PARD3BQ8TEW8 1205 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SNX21Q969T3 373 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 CNOT6LQ96LI5 555 aaKnown RBP17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SDCBP2Q9H190 292 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 FAM13BQ9NYF5 915 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SDK1Q7Z5N4 2213 aa17.74■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 BCLAF3A2AJT9 711 aaKnown RBP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 SLC9A3R1O14745 358 aaPredicted RBP17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 KRT37O76014 449 aa17.73■□□□□ 0.43
VPS9D1-AS1-201ENST00000562298 RTN3O95197 1032 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms