RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 BMP5P22003 454 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 PXNP49023 591 aaPredicted RBP7.43□□□□□ -1.22
SMG1-204ENST00000561940 MPP3Q13368 585 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 DYRK1AQ13627 763 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 RAPGEF1Q13905 1077 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 ZACNQ401N2 412 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 OLFML1Q6UWY5 402 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 LAYNQ6UX15 382 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 Q6ZNX1 250 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 KRT28Q7Z3Y7 464 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 CACNA2D3Q8IZS8 1091 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.43□□□□□ -1.22
SMG1-204ENST00000561940 SLC30A5Q8TAD4 765 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 BPIFB1Q8TDL5 484 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 STYXQ8WUJ0 223 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 COQ10AQ96MF6 247 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 NELL2Q99435 816 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.43□□□□□ -1.22
SMG1-204ENST00000561940 LRFN1Q9P244 771 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 FER1L4A9Z1Z3 1794 aa7.43□□□□□ -1.22
SMG1-204ENST00000561940 A0A1W2PS29 197 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 GOLGA6L3A6NEY3 463 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 TRIM38O00635 465 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 CCP110O43303 1012 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 TNFRSF6BO95407 300 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ESRRBO95718 433 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 TPH1P17752 444 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 TGM1P22735 817 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ADRA1BP35368 520 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ANXA11P50995 505 aaKnown RBP7.42□□□□□ -1.22
SMG1-204ENST00000561940 COPAP53621 1224 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 RPS7P62081 194 aaKnown RBP7.42□□□□□ -1.22
SMG1-204ENST00000561940 MYO1EQ12965 1108 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 PTCHD3Q3KNS1 767 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 MGAT5BQ3V5L5 792 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 VPS53Q5VIR6 699 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 RAP1GAP2Q684P5 730 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 KIAA0408Q6ZU52 694 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ADGRG5Q8IZF4 528 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 CCDC150Q8NCX0 1101 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 FUBP1Q96AE4 644 aaKnown RBP7.42□□□□□ -1.22
SMG1-204ENST00000561940 SCLT1Q96NL6 688 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 RMDN3Q96TC7 470 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 MAGEH1Q9H213 219 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 AGO4Q9HCK5 861 aaKnown RBP7.42□□□□□ -1.22
SMG1-204ENST00000561940 TM7SF3Q9NS93 570 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ZSCAN32Q9NX65 697 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 DKK4Q9UBT3 224 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 CDY1Q9Y6F8 540 aa7.42□□□□□ -1.22
SMG1-204ENST00000561940 ACKR2O00590 384 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 HNRNPDLO14979 420 aaKnown RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 PIP5K1BO14986 540 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 KIAA0355O15063 1070 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 KCNQ3O43525 872 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 PIAS2O75928 621 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 RASAL1O95294 804 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 ITGALP20701 1170 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 KCNA3P22001 575 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 NDUFV1P49821 464 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 RENBPP51606 427 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 SPARCL1Q14515 664 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 INSCQ1MX18 579 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 ARHGAP40Q5TG30 622 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 SP5Q6BEB4 398 aaPredicted RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 PPM1EQ8WY54 764 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 ZG16BQ96DA0 208 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 EIF2AQ9BY44 585 aaKnown RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 PCDHAC1Q9H158 963 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 MYLK2Q9H1R3 596 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 DHX36Q9H2U1 1008 aaKnown RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 ZNHIT2Q9UHR6 403 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 NDRG4Q9ULP0 352 aaKnown RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 ZMYND8Q9ULU4 1186 aaPredicted RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 CAPN11Q9UMQ6 739 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 SCAF8Q9UPN6 1271 aaKnown RBP7.41□□□□□ -1.22
SMG1-204ENST00000561940 MAST3O60307 1309 aa7.41□□□□□ -1.22
SMG1-204ENST00000561940 SRGAP2O75044 1071 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 NUDT3O95989 172 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 FGAP02671 866 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 PECAM1P16284 738 aaPredicted RBP7.4□□□□□ -1.22
SMG1-204ENST00000561940 PAX3P23760 479 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 ATICP31939 592 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 CXCR5P32302 372 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 NPTX2P47972 431 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 PPM1FP49593 454 aaPredicted RBP7.4□□□□□ -1.22
SMG1-204ENST00000561940 DGKEP52429 567 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 BLOC1S1P78537 153 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 ZNF750Q32MQ0 723 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 RBM20Q5T481 1227 aaKnown RBP7.4□□□□□ -1.22
SMG1-204ENST00000561940 TMTC4Q5T4D3 741 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 LIN54Q6MZP7 749 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 RGS7BPQ6MZT1 257 aaPredicted RBP7.4□□□□□ -1.22
SMG1-204ENST00000561940 CCDC28AQ8IWP9 274 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 FAM9AQ8IZU1 332 aaPredicted RBP7.4□□□□□ -1.22
SMG1-204ENST00000561940 CPXCR1Q8N123 301 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 TOR1AIP2Q8NFQ8 470 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 DNAJB14Q8TBM8 379 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 TMEM171Q8WVE6 324 aa7.4□□□□□ -1.22
SMG1-204ENST00000561940 LPIN2Q92539 896 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms