RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 CRY1Q16526 586 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 PREPLQ4J6C6 727 aaPredicted RBP5.81□□□□□ -1.48
HERC1-213ENST00000561359 GLRA4Q5JXX5 417 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ZNF280DQ6N043 979 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ATCAYQ86WG3 371 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 TMC8Q8IU68 726 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 TMTC2Q8N394 836 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 DTWD1Q8N5C7 304 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 FANCBQ8NB91 859 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 C3orf58Q8NDZ4 430 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 USP33Q8TEY7 942 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 HMGB4Q8WW32 186 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 EZH1Q92800 747 aaPredicted RBP5.81□□□□□ -1.48
HERC1-213ENST00000561359 LENG9Q96B70 501 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 WBP1Q96G27 269 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 CCDC136Q96JN2 1154 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 CDC6Q99741 560 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 PI4K2AQ9BTU6 479 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 LRRC3Q9BY71 257 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 CXCL16Q9H2A7 254 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 TASP1Q9H6P5 420 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 BARHL2Q9NY43 387 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 ANKMY1Q9P2S6 941 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 MAFFQ9ULX9 164 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 MMP17Q9ULZ9 603 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 PAXBP1Q9Y5B6 917 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 HEMK1Q9Y5R4 338 aaPredicted RBP5.81□□□□□ -1.48
HERC1-213ENST00000561359 FLNCQ14315 2725 aa5.81□□□□□ -1.48
HERC1-213ENST00000561359 KNL1Q8NG31 2342 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 A0A1B0GUA9 196 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 hCG_1984214I3L0E3 225 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 SYN3O14994 580 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 MARCH6O60337 910 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 RPLP1P05386 114 aaKnown RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 KRT10P13645 584 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 GNSP15586 552 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 ADSSP30520 456 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 CIITAP33076 1130 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 AVPR1AP37288 418 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 CYP4F8P98187 520 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 TLE3Q04726 772 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 DNM1Q05193 864 aaKnown RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 CCDC173Q0VFZ6 552 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 BFSP1Q12934 665 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 PDGFRLQ15198 375 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 UPP1Q16831 310 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 C20orf194Q5TEA3 1177 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 CD300LGQ6UXG3 332 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 SLC36A4Q6YBV0 504 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 ZNF438Q7Z4V0 828 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 DNAJB7Q7Z6W7 309 aaPredicted RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 MICU3Q86XE3 530 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 REXO1Q8N1G1 1221 aaKnown RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 CPA6Q8N4T0 437 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 IL22RA1Q8N6P7 574 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 ZNF713Q8N859 430 aaPredicted RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 OR13H1Q8NG92 308 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 EXOC6Q8TAG9 804 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 SLC5A5Q92911 643 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 HSPA12BQ96MM6 686 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 UROC1Q96N76 676 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 PGLYRP2Q96PD5 576 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 GCNAQ96QF7 691 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 DNAJC25Q9H1X3 360 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 ECT2Q9H8V3 914 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 GOLGA2P5Q9HBQ8 144 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 TPSG1Q9NRR2 321 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 ABI2Q9NYB9 513 aaPredicted RBP5.8□□□□□ -1.48
HERC1-213ENST00000561359 TBX20Q9UMR3 447 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 GDAQ9Y2T3 454 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 PPME1Q9Y570 386 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 NUB1Q9Y5A7 615 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 SLC12A7Q9Y666 1083 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 BOD1L1Q8NFC6 3051 aa5.8□□□□□ -1.48
HERC1-213ENST00000561359 PTPRBP23467 1997 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 A0A1W2PQD8 194 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 PRC1O43663 620 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC1-213ENST00000561359 PSMD10O75832 226 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 KLF8O95600 359 aaPredicted RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 HNRNPLP14866 589 aaKnown RBP eCLIP5.79□□□□□ -1.48
HERC1-213ENST00000561359 JUPP14923 745 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 CDC25CP30307 473 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 QARSP47897 775 aaKnown RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 GRIK2Q13002 908 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 DUSP4Q13115 394 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 CAPSQ13938 189 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 MRPL58Q14197 206 aaKnown RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 SMAD1Q15797 465 aaKnown RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 TAF12Q16514 161 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 C8orf34Q49A92 452 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 XKR9Q5GH70 373 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ARHGAP40Q5TG30 622 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 DHRS13Q6UX07 377 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 SYNE3Q6ZMZ3 975 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 ZNF574Q6ZN55 896 aaPredicted RBP5.79□□□□□ -1.48
HERC1-213ENST00000561359 ITIH5Q86UX2 942 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 NOSTRINQ8IVI9 506 aa5.79□□□□□ -1.48
HERC1-213ENST00000561359 SPACA3Q8IXA5 215 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms