RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MAGEA11P43364 429 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 EPHB4P54760 987 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 ARPP19P56211 112 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 RWDD2BP57060 319 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 YWHAZP63104 245 aaKnown RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 CREMQ03060 361 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 ADIGQ0VDE8 80 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 PSMD5Q16401 504 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 HADHQ16836 314 aaKnown RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 ODF2Q5BJF6 829 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 LLGL2Q6P1M3 1020 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 CC2D1AQ6P1N0 951 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 OLFML1Q6UWY5 402 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 SLC26A9Q7LBE3 791 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 TAS1R1Q7RTX1 841 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 RHOT1Q8IXI2 618 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 NIPA2Q8N8Q9 360 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 FBXO22Q8NEZ5 403 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 RIN2Q8WYP3 895 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 GOLGA1Q92805 767 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 RPGRIP1Q96KN7 1286 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 TMEM209Q96SK2 561 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 KCNK16Q96T55 309 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 NAP1L3Q99457 506 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 CARD9Q9H257 536 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 CHST7Q9NS84 486 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 TMLHEQ9NVH6 421 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 ABI2Q9NYB9 513 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 CXXC1Q9P0U4 656 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 TJP2Q9UDY2 1190 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 PACSIN2Q9UNF0 486 aaPredicted RBP10.82□□□□□ -0.68
USP3-219ENST00000561326 USTQ9Y2C2 406 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 PCDHA3Q9Y5H8 950 aa10.82□□□□□ -0.68
USP3-219ENST00000561326 MYO16Q9Y6X6 1858 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CTAGE15A4D2H0 777 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 TBC1D4O60343 1298 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 HSF2BPO75031 334 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 SRGAP2O75044 1071 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 BEST1O76090 585 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 ZBED1O96006 694 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 URODP06132 367 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CTAGE8P0CG41 777 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CYP2F1P24903 491 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 SDC4P31431 198 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CXCR5P32302 372 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 OR1D2P34982 312 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 DNA2P51530 1060 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 ZNF143P52747 638 aaPredicted RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 TERF1P54274 439 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 RPL10AP62906 217 aaKnown RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 MRPS5P82675 430 aaKnown RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 DSG1Q02413 1049 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 RAB41Q5JT25 222 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 RTP2Q5QGT7 225 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 LRRC38Q5VT99 294 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 TPGS2Q68CL5 300 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CTAGE6Q86UF2 777 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 TMEM173Q86WV6 379 aaPredicted RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 SCN4BQ8IWT1 228 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CTAGE4Q8IX94 777 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 RNF168Q8IYW5 571 aaPredicted RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 VPS52Q8N1B4 723 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 SCML4Q8N228 414 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 JOSD2Q8TAC2 188 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 BCL7CQ8WUZ0 217 aaPredicted RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 RXFP2Q8WXD0 754 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 IRGQQ8WZA9 623 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CLP1Q92989 425 aaKnown RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 FAM149B1Q96BN6 582 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CAPZA3Q96KX2 299 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 B3GALT6Q96L58 329 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 C8orf48Q96LL4 319 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 CEP295NLQ96MC4 621 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 PSMB7Q99436 277 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 HERC2P3Q9BVR0 1158 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 TRIM7Q9C029 511 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 FBXO44Q9H4M3 255 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP3-219ENST00000561326 MRPL17Q9NRX2 175 aaKnown RBP10.81□□□□□ -0.68
USP3-219ENST00000561326 RRN3Q9NYV6 651 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.81□□□□□ -0.68
USP3-219ENST00000561326 MTRRQ9UBK8 725 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 TMEM59LQ9UK28 342 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 MAFFQ9ULX9 164 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 COL4A6Q14031 1691 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 GBF1Q92538 1859 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 PLXNA4Q9HCM2 1894 aa10.81□□□□□ -0.68
USP3-219ENST00000561326 C2CD4BA6NLJ0 364 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 F8VP50 259 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 C2CD2LO14523 706 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CAPN9O14815 690 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 DDX3YO15523 660 aaKnown RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 CEP104O60308 925 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 GABBR2O75899 941 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 FGF18O76093 207 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 RTN3O95197 1032 aaPredicted RBP10.8□□□□□ -0.68
USP3-219ENST00000561326 GJB6O95452 261 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 KRT7P08729 469 aa10.8□□□□□ -0.68
USP3-219ENST00000561326 OR4Q2P0C623 313 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms