RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 PAQR9Q6ZVX9 377 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 NELL1Q92832 810 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 TWNKQ96RR1 684 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 APOBEC3GQ9HC16 384 aaKnown RBP18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 DMAP1Q9NPF5 467 aaPredicted RBP18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 FAM49BQ9NUQ9 324 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 ZSCAN32Q9NX65 697 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 DUS2Q9NX74 493 aaKnown RBP18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 EHD2Q9NZN4 543 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 ARHGAP26Q9UNA1 814 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 PCDHGA2Q9Y5H1 932 aa18.27■□□□□ 0.52
CDC42BPB-208ENST00000561271 CEP192Q8TEP8 1941 aa18.27■□□□□ 0.51
CDC42BPB-208ENST00000561271 IFNAR2P48551 515 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 PDE6CP51160 858 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 DGKKQ5KSL6 1271 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 ZNF658Q5TYW1 1059 aaPredicted RBP18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 NAIF1Q69YI7 327 aaPredicted RBP18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 NUP93Q8N1F7 819 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 CPA6Q8N4T0 437 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 ZBTB44Q8NCP5 570 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 OSCP1Q8WVF1 389 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 ATRIPQ8WXE1 791 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 FBXO32Q969P5 355 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 SLITRK1Q96PX8 696 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 C2orf42Q9NWW7 574 aa18.26■□□□□ 0.51
CDC42BPB-208ENST00000561271 THADAQ6YHU6 1953 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SCAMP3O14828 347 aaKnown RBP18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 AP1G2O75843 785 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 EPB41P11171 864 aaKnown RBP18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 CD58P19256 250 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 YWHAQP27348 245 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SLC5A3P53794 718 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 ZXDBP98169 803 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 INCA1Q0VD86 236 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 EML3Q32P44 896 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 FSTL4Q6MZW2 842 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SPEM1Q8N4L4 309 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 C12orf29Q8N999 325 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SUMF1Q8NBK3 374 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SCAMP5Q8TAC9 235 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SMARCE1Q969G3 411 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 GSDMAQ96QA5 445 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 HINFPQ9BQA5 517 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 NIF3L1Q9GZT8 377 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 TMEM8AQ9HCN3 771 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 SMPD4Q9NXE4 827 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 PCDHA5Q9Y5H7 936 aa18.25■□□□□ 0.51
CDC42BPB-208ENST00000561271 TRIM49BA6NDI0 452 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 LEFTY2O00292 366 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 CETN3O15182 167 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 LILRB5O75023 590 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 BEST1O76090 585 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 RTN3O95197 1032 aaPredicted RBP18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 SMC2O95347 1197 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 OLFM2O95897 454 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 OAS1P00973 400 aaKnown RBP18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 TCF3P15923 654 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 PFKLP17858 780 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 ADORA2BP29275 332 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 GJA4P35212 333 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 CXCL12P48061 93 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 MXI1P50539 228 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 PMS1P54277 932 aaKnown RBP18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 ENPEPQ07075 957 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 TMEM196Q5HYL7 178 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 PKN3Q6P5Z2 889 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 MAMSTRQ6ZN01 415 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 UNC93AQ86WB7 457 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 ZMIZ2Q8NF64 920 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 ATP2A3Q93084 1043 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 JAKMIP2Q96AA8 810 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 TSG101Q99816 390 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 SMOQ99835 787 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 RNF38Q9H0F5 515 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 ECT2Q9H8V3 914 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 CPQQ9Y646 472 aa18.24■□□□□ 0.51
CDC42BPB-208ENST00000561271 TNFRSF10BO14763 440 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 EGFP01133 1207 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 HOXC13P31276 330 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 PPP3CCP48454 512 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 SLC7A9P82251 487 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 DMWDQ09019 674 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 COBLL1Q53SF7 1204 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 DCAF17Q5H9S7 520 aaPredicted RBP18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 KRT39Q6A163 491 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 CRYBG2Q8N1P7 616 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 CCDC150Q8NCX0 1101 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 PDZD8Q8NEN9 1154 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 SPATA20Q8TB22 786 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 SEMA4DQ92854 862 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 TIGD1Q96MW7 591 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 FAM126AQ9BYI3 521 aaPredicted RBP18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 GMIPQ9P107 970 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 SMG5Q9UPR3 1016 aaKnown RBP18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 DCHS1Q96JQ0 3298 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 PLXND1Q9Y4D7 1925 aa18.23■□□□□ 0.51
CDC42BPB-208ENST00000561271 TRDMT1O14717 391 aaKnown RBP18.22■□□□□ 0.51
CDC42BPB-208ENST00000561271 MBL2P11226 248 aaPredicted RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms