RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 ACBD6Q9BR61 282 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 TRPC7Q9HCX4 862 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 HOOK1Q9UJC3 728 aaKnown RBP11.46□□□□□ -0.57
TPM1-227ENST00000560970 AGAP1Q9UPQ3 857 aa11.46□□□□□ -0.57
TPM1-227ENST00000560970 CFAP47Q6ZTR5 3102 aa11.46□□□□□ -0.58
TPM1-227ENST00000560970 SDK1Q7Z5N4 2213 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 BIN1O00499 593 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 AXIN1O15169 862 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 CALUO43852 315 aaPredicted RBP11.45□□□□□ -0.58
TPM1-227ENST00000560970 KIF20AO95235 890 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 APBB3O95704 486 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 USP17L7P0C7H9 530 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 NR2F2P24468 414 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 PCSK1P29120 753 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 GJA4P35212 333 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 PDE6CP51160 858 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 DLG4P78352 724 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 MORC3Q14149 939 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 SURF1Q15526 300 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 ELF2Q15723 593 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 CCDC142Q17RM4 750 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 PLA2G2CQ5R387 149 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 C1orf220Q5T0J3 134 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 CEP135Q66GS9 1140 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 SYT13Q7L8C5 426 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 SPATA2LQ8IUW3 424 aaPredicted RBP11.45□□□□□ -0.58
TPM1-227ENST00000560970 CSGALNACT2Q8N6G5 542 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 TOP6BLQ8N6T0 577 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 RPLP0P6Q8NHW5 317 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 CACTINQ8WUQ7 758 aaKnown RBP11.45□□□□□ -0.58
TPM1-227ENST00000560970 OSCP1Q8WVF1 389 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 CD101Q93033 1021 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 EEF2KMTQ96G04 330 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 ZC3H10Q96K80 434 aaKnown RBP11.45□□□□□ -0.58
TPM1-227ENST00000560970 GBP4Q96PP9 640 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 ECT2Q9H8V3 914 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 DUS2Q9NX74 493 aaKnown RBP11.45□□□□□ -0.58
TPM1-227ENST00000560970 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 ANGPTL2Q9UKU9 493 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 SNX9Q9Y5X1 595 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 WNT6Q9Y6F9 365 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 ADAMTS9Q9P2N4 1935 aa11.45□□□□□ -0.58
TPM1-227ENST00000560970 TNNC2P02585 160 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 KRT19P08727 400 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 TCF3P15923 654 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 TNNI1P19237 187 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 PTMSP20962 102 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 CYP2F1P24903 491 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 PMLP29590 882 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 LHX1P48742 406 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 DDR2Q16832 855 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 EML3Q32P44 896 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 PLK5Q496M5 336 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 STPG1Q5TH74 334 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 TDRD10Q5VZ19 366 aaKnown RBP11.44□□□□□ -0.58
TPM1-227ENST00000560970 NAIF1Q69YI7 327 aaPredicted RBP11.44□□□□□ -0.58
TPM1-227ENST00000560970 C4orf50Q6ZRC1 276 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 TRAPPC11Q7Z392 1133 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 OSTM1Q86WC4 334 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 ZC3H3Q8IXZ2 948 aaKnown RBP11.44□□□□□ -0.58
TPM1-227ENST00000560970 GPT2Q8TD30 523 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 PARD3BQ8TEW8 1205 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 MYLPFQ96A32 169 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 ELMO3Q96BJ8 720 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 FNBP1Q96RU3 617 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 EDEM2Q9BV94 578 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 CLSTN2Q9H4D0 955 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 VPS45Q9NRW7 570 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 RXFP3Q9NSD7 469 aa11.44□□□□□ -0.58
TPM1-227ENST00000560970 WDFY3Q8IZQ1 3526 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 TP53BP1Q12888 1972 aaPredicted RBP11.43□□□□□ -0.58
TPM1-227ENST00000560970 PPP1R3GB7ZBB8 358 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 GABRDO14764 452 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 HCRTO43612 131 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 VNN1O95497 513 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 NFATC1O95644 943 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 CST3P01034 146 aaPredicted RBP11.43□□□□□ -0.58
TPM1-227ENST00000560970 TRIM49P0CI25 452 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 TRIM49CP0CI26 452 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 MAGEA11P43364 429 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 CLDN10P78369 228 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 DMC1Q14565 340 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 DUOXA2Q1HG44 320 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 EDRF1Q3B7T1 1238 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 ANKRD40Q6AI12 368 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 C11orf74Q86VG3 221 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 SCN4BQ8IWT1 228 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 CCDC26Q8TAB7 109 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 EZH1Q92800 747 aaPredicted RBP11.43□□□□□ -0.58
TPM1-227ENST00000560970 SLC22A12Q96S37 553 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 SYT15Q9BQS2 421 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 SMOC1Q9H4F8 434 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 KIAA1468Q9P260 1216 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 EBF1Q9UH73 591 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 GTF3C4Q9UKN8 822 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 ARHGAP26Q9UNA1 814 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 CTNND2Q9UQB3 1225 aa11.43□□□□□ -0.58
TPM1-227ENST00000560970 PCDH15Q96QU1 1955 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms