RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 MARCKSP29966 332 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 RAB1AP62820 205 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 GCKRQ14397 625 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 NFE2L1Q14494 772 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 SETMARQ53H47 684 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ERMARDQ5T6L9 678 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 AGBL2Q5U5Z8 902 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CDKAL1Q5VV42 579 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CDH24Q86UP0 819 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ANKRD35Q8N283 1001 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 KAT5Q92993 513 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 PPP2R3CQ969Q6 453 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF653Q96CK0 615 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 TMEM41AQ96HV5 264 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 KAZALD1Q96I82 304 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 SUCLG2Q96I99 432 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF845Q96IR2 970 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 IFT74Q96LB3 600 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF317Q96PQ6 595 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CDK15Q96Q40 435 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CHP1Q99653 195 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 TIPINQ9BVW5 301 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 FAM129AQ9BZQ8 928 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CD244Q9BZW8 370 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 RAB17Q9H0T7 212 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CNOT10Q9H9A5 744 aaKnown RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 TBC1D7Q9P0N9 293 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 SH3GLB1Q9Y371 365 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 KCPQ6ZWJ8 1503 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 H0YGN5 161 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 RNF225M0QZC1 329 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 POTEJP0CG39 1038 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CD247P20963 164 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 PSMD7P51665 324 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 OXCT1P55809 520 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 PLOD1Q02809 727 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 SULT2A1Q06520 285 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 GALNTL6Q49A17 601 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 ODF2Q5BJF6 829 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 LONP2Q86WA8 852 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 SRBD1Q8N5C6 995 aaKnown RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 C2orf69Q8N8R5 385 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 AFG1LQ8WV93 481 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 KLHL29Q96CT2 875 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC46Q96FV0 321 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 XPO6Q96QU8 1125 aaKnown RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CARD9Q9H257 536 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 PRDM12Q9H4Q4 367 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 RNPEPL1Q9HAU8 725 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 DCP1AQ9NPI6 582 aaPredicted RBP7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 RMND1Q9NWS8 449 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 B4GALT6Q9UBX8 382 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 CBLCQ9ULV8 474 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 NFS1Q9Y697 457 aa7.08□□□□□ -1.28
TSPAN3-209ENST00000560715 BCL9O00512 1426 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 COL22A1Q8NFW1 1626 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 TOGARAM1Q9Y4F4 1720 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 TAF5LO75529 589 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 GLI1P08151 1106 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 RARBP10826 455 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MYCLP12524 364 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MYF5P13349 255 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 FDPSP14324 419 aaKnown RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 KRT15P19012 456 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 AKAP5P24588 427 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MATR3P43243 847 aaKnown RBP eCLIP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 PPARAQ07869 468 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MAPK7Q13164 816 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 LSAMPQ13449 338 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 SCARB2Q14108 478 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 EFR3AQ14156 821 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 HIF1AQ16665 826 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ZNF674Q2M3X9 581 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 USH1GQ495M9 461 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 STYK1Q6J9G0 422 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ASRGL1Q7L266 308 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 VN1R5Q7Z5H4 357 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 GPR149Q86SP6 731 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 SLC15A3Q8IY34 581 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 LRRC43Q8N309 656 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ERMNQ8TAM6 284 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 DNAJC9Q8WXX5 260 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ELMO3Q96BJ8 720 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 EAF2Q96CJ1 260 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 HAPLN3Q96S86 360 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ARHGAP39Q9C0H5 1083 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 XAB2Q9HCS7 855 aaKnown RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 CTTNBP2NLQ9P2B4 639 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 RGS17Q9UGC6 210 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 DDX25Q9UHL0 483 aaKnown RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 PCOLCE2Q9UKZ9 415 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 KCNH3Q9ULD8 1083 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 ZMYND8Q9ULU4 1186 aaPredicted RBP7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 MAP3K15Q6ZN16 1313 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 CCDC154A6NI56 674 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 FOXN1O15353 648 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 EGFRP00533 1210 aa7.07□□□□□ -1.28
TSPAN3-209ENST00000560715 BCRP11274 1271 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms