RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 CEBPBP17676 345 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ADORA2BP29275 332 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 PSEN1P49768 467 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 MAP3K7CLP57077 242 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ORC1Q13415 861 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 PTPN21Q16825 1174 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 SNX30Q5VWJ9 437 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 KIAA1958Q8N8K9 716 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 STKLD1Q8NE28 680 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ZMIZ2Q8NF64 920 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 DEPDC1BQ8WUY9 529 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 SMARCD2Q92925 531 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 KAT5Q92993 513 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ELSPBP1Q96BH3 223 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ASB16Q96NS5 453 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 KCNK16Q96T55 309 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 SLITRK6Q9H5Y7 841 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 KIF9Q9HAQ2 790 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 ZFP14Q9HCL3 533 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 RTN4Q9NQC3 1192 aaKnown RBP14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 SIK3Q9Y2K2 1263 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 PATJQ8NI35 1801 aa14.77□□□□□ -0.04
PKNOX1-209ENST00000560448 DOCK6Q96HP0 2047 aa14.77□□□□□ -0.05
PKNOX1-209ENST00000560448 MYH10P35580 1976 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 SERPINC1P01008 464 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 GNA15P30679 374 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 PLA2G4AP47712 749 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 CACNA2D1P54289 1103 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 TDGQ13569 410 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 HTR4Q13639 388 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 TEAD2Q15562 447 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 SDHAF4Q5VUM1 108 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 DPY19L2P1Q6NXN4 242 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 MON1AQ86VX9 555 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 FAM71AQ8IYT1 594 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 SCML4Q8N228 414 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 NEK11Q8NG66 645 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 GPR152Q8TDT2 470 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 KCTD13Q8WZ19 329 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 IQCDQ96DY2 449 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 TCEAL4Q96EI5 215 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 LSM14BQ9BX40 385 aaKnown RBP14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 NAA15Q9BXJ9 866 aaKnown RBP14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 KCNK12Q9HB15 430 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 TMEM30AQ9NV96 361 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 IMPACTQ9P2X3 320 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 SCML2Q9UQR0 700 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 DENND4CQ5VZ89 1909 aa14.76□□□□□ -0.05
PKNOX1-209ENST00000560448 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 DCXO43602 365 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 CCDC172P0C7W6 258 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 AVPR1AP37288 418 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 UBASH3AP57075 661 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 RAPGEF1Q13905 1077 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZNF268Q14587 947 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ARHGAP44Q17R89 818 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 GOLGA7BQ2TAP0 167 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 PKDCCQ504Y2 493 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 GPR158Q5T848 1215 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TMEM150AQ86TG1 271 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TADA2BQ86TJ2 420 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ARHGAP18Q8N392 663 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZSCAN18Q8TBC5 510 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 STK32AQ8WU08 396 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ING5Q8WYH8 240 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 FBXO32Q969P5 355 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 MCRS1Q96EZ8 462 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 HSFY1Q96LI6 401 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 NAP1L5Q96NT1 182 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 NECAB3Q96P71 396 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 CDK5RAP1Q96SZ6 601 aaKnown RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 CYLDQ9NQC7 956 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TLR8Q9NR97 1041 aaKnown RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 LIMD1Q9UGP4 676 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 USP3Q9Y6I4 520 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 NCOR1O75376 2440 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 NUP210Q8TEM1 1887 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZNF840PA6NDX5 716 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 HHLA1C9JL84 531 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 F8VZ95 297 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 RNF225M0QZC1 329 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 BEST1O76090 585 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TCF3P15923 654 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 SP100P23497 879 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ACADSBP45954 432 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 KIF11P52732 1056 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 SNX16P57768 344 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TAF10Q12962 218 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 DRAP1Q14919 205 aaPredicted RBP14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 SYCP1Q15431 976 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 RAB41Q5JT25 222 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 GJB7Q6PEY0 223 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 TTC30AQ86WT1 665 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZNF677Q86XU0 584 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 CMTM8Q8IZV2 173 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZNF276Q8N554 614 aa14.75□□□□□ -0.05
PKNOX1-209ENST00000560448 ZNF606Q8WXB4 792 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms