RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 ECT2Q9H8V3 914 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 CYP3A43Q9HB55 503 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 HPS4Q9NQG7 708 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 TBC1D14Q9P2M4 693 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 MYO15AQ9UKN7 3530 aa14.96□□□□□ -0.01
TPM1-223ENST00000560445 CHURC1-FNTBB4DL54 471 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 HCRTO43612 131 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ZNF202O95125 648 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ADH1CP00326 375 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ABL1P00519 1130 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ASS1P00966 412 aaKnown RBP14.95□□□□□ -0.02
TPM1-223ENST00000560445 TDGF1P13385 188 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 SATB1Q01826 763 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 GOLGA8FQ08AF8 430 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 GOLGA8DPQ0D2H9 430 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 SV2AQ7L0J3 742 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 FAM35AQ86V20 835 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 CAMKK1Q8N5S9 505 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 CD101Q93033 1021 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 OTUB2Q96DC9 234 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ZNF518BQ9C0D4 1074 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 NACA2Q9H009 215 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
TPM1-223ENST00000560445 ZDHHC9Q9Y397 364 aa14.95□□□□□ -0.02
TPM1-223ENST00000560445 ANAPC1Q9H1A4 1944 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 C2orf78A6NCI8 922 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.94□□□□□ -0.02
TPM1-223ENST00000560445 CETN3O15182 167 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 OLFM2O95897 454 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 EPB41P11171 864 aaKnown RBP14.94□□□□□ -0.02
TPM1-223ENST00000560445 GJA4P35212 333 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 PPP1R2P41236 205 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 TAF10Q12962 218 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 ADAM9Q13443 819 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 STIM1Q13586 685 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 SIM2Q14190 667 aaPredicted RBP14.94□□□□□ -0.02
TPM1-223ENST00000560445 PUM1Q14671 1186 aaKnown RBP eCLIP14.94□□□□□ -0.025e-9■□□□□ 8.1
TPM1-223ENST00000560445 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 SCARA5Q6ZMJ2 495 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 NUDT18Q6ZVK8 323 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 CEP68Q76N32 757 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.94□□□□□ -0.02
TPM1-223ENST00000560445 KIAA2013Q8IYS2 634 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 GSDMAQ96QA5 445 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 B3GNT5Q9BYG0 378 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 DPEP3Q9H4B8 488 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 KRT82Q9NSB4 513 aa14.94□□□□□ -0.02
TPM1-223ENST00000560445 RBM12Q9NTZ6 932 aaKnown RBP14.94□□□□□ -0.02
TPM1-223ENST00000560445 AP1G2O75843 785 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 AKAP3O75969 853 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 HLA-DRAP01903 254 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 RETP07949 1114 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 FAM200BP0CF97 657 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 ARSAP15289 507 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 EML3Q32P44 896 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 HECTD3Q5T447 861 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 TRIM68Q6AZZ1 485 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 PRR23BQ6ZRT6 265 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 Q6ZS52 159 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 TADA2BQ86TJ2 420 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 C11orf74Q86VG3 221 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 WDR5BQ86VZ2 330 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 CRYBG2Q8N1P7 616 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 PLEKHO2Q8TD55 490 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 CYP2S1Q96SQ9 504 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 NT5C1AQ9BXI3 368 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 NIF3L1Q9GZT8 377 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 TMEM8AQ9HCN3 771 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 PNPLA8Q9NP80 782 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 WNT6Q9Y6F9 365 aa14.93□□□□□ -0.02
TPM1-223ENST00000560445 E2F8A0AVK6 867 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 LEFTY2O00292 366 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 VNN1O95497 513 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 OAS1P00973 400 aaKnown RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 MBL2P11226 248 aaPredicted RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 EIF2DP41214 584 aaKnown RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 NDST1P52848 882 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SLC5A3P53794 718 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SLC8A3P57103 927 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 USP46P62068 366 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 INCA1Q0VD86 236 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 IFRD2Q12894 506 aaPredicted RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SNX30Q5VWJ9 437 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 KRT39Q6A163 491 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SCARA3Q6AZY7 606 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 FSTL4Q6MZW2 842 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 ACOT1Q86TX2 421 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SLC22A12Q96S37 553 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 DUSP9Q99956 384 aaKnown RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 TLR8Q9NR97 1041 aaKnown RBP14.92□□□□□ -0.02
TPM1-223ENST00000560445 USP18Q9UMW8 372 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 SH3BP1Q9Y3L3 701 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 PCDHA5Q9Y5H7 936 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 CPQQ9Y646 472 aa14.92□□□□□ -0.02
TPM1-223ENST00000560445 K7ESF4 209 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 CLDN5O00501 218 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 SLC16A3O15427 465 aaKnown RBP14.91□□□□□ -0.02
TPM1-223ENST00000560445 RNF40O75150 1001 aa14.91□□□□□ -0.02
TPM1-223ENST00000560445 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms