RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MTUS1Q9ULD2 1270 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 USP18Q9UMW8 372 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 UTP11Q9Y3A2 253 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 TTC3P53804 2025 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 AP1G2O75843 785 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 RNF8O76064 485 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 NPR3P17342 541 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 RPL9P32969 192 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 PTGIRP43119 386 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MNX1P50219 401 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 ZNF143P52747 638 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 IFRD2Q12894 506 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 KLF1Q13351 362 aaPredicted RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 NOMO2Q5JPE7 1267 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 HFE2Q6ZVN8 426 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 CEP57Q86XR8 500 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 NIPA2Q8N8Q9 360 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 EXD1Q8NHP7 514 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM172AQ8WUF8 416 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 RSPH1Q8WYR4 309 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 HNRNPABQ99729 332 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 HIPK3Q9H422 1215 aa11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 RANBP2P49792 3224 aaKnown RBP11.41□□□□□ -0.58
SNRPA1-211ENST00000560433 MAP2K7O14733 419 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 CAND2O75155 1236 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 MAP3K6O95382 1288 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 BDNFP23560 247 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 MCM3P25205 808 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 TLE2Q04725 743 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 FAAP100Q0VG06 881 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ZC3H12AQ5D1E8 599 aaKnown RBP11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 SLC39A5Q6ZMH5 540 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 SPOCD1Q6ZMY3 1216 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 LRRN4Q8WUT4 740 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 SMOQ99835 787 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 CALN1Q9BXU9 219 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM124BQ9H5Z6 455 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 TMPRSS4Q9NRS4 437 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ATP11BQ9Y2G3 1177 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 SQORQ9Y6N5 450 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 TUBBP07437 444 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ODC1P11926 461 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 SKIP12755 728 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 CHRNA3P32297 505 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 LHX1P48742 406 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 GSCP56915 257 aaPredicted RBP11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 BFSP2Q13515 415 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 CA9Q16790 459 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 MAP9Q49MG5 647 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 FAM35AQ86V20 835 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 KCTD6Q8NC69 237 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ZMIZ2Q8NF64 920 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ADAM32Q8TC27 787 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 MYLPFQ96A32 169 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 DCLK3Q9C098 648 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 UBN1Q9NPG3 1134 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 ASNSD1Q9NWL6 643 aa11.4□□□□□ -0.58
SNRPA1-211ENST00000560433 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 C3orf70A6NLC5 250 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 H3BQF6 201 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 TRUB2O95900 331 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 EOMESO95936 686 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 USP17L7P0C7H9 530 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM200BP0CF97 657 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 KDELR1P24390 212 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 SDC4P31431 198 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 CDKN2BP42772 138 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 AARSP49588 968 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 TKTL1P51854 596 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 EPHB4P54760 987 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 PLTPP55058 493 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 OVOS1Q6IE37 1185 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 CYP4V2Q6ZWL3 525 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 COLGALT2Q8IYK4 626 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 RCOR2Q8IZ40 523 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 ABI1Q8IZP0 508 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 CCDC33Q8N5R6 958 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 GLIS1Q8NBF1 620 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 FNIP1Q8TF40 1166 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM193BQ96PV7 902 aaPredicted RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 ERP44Q9BS26 406 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 CNPY3Q9BT09 278 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 LRRC4Q9HBW1 653 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 DNPEPQ9ULA0 475 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 PCDHB7Q9Y5E2 793 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 hCG_1818297A0A087WSY0 165 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 NRP1O14786 923 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 XPO1O14980 1071 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 ETS1P14921 441 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 RPL21P46778 160 aaKnown RBP11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 GYS2P54840 703 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 HDAC4P56524 1084 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 FAM189BP81408 668 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 KRT17Q04695 432 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 ADCY1Q08828 1119 aa11.39□□□□□ -0.59
SNRPA1-211ENST00000560433 PPP1R7Q15435 360 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms