RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 BIN1O00499 593 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 PMM2O15305 246 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 PAPSS2O95340 614 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 ANXA13P27216 316 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 KPNA1P52294 538 aaPredicted RBP16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 USP46P62068 366 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 CBWD6Q4V339 395 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 CBWD3Q5JTY5 395 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 CBWD5Q5RIA9 395 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 ACOT1Q86TX2 421 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 FUKQ8N0W3 1084 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 CCDC150Q8NCX0 1101 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 MMRN2Q9H8L6 949 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 KIF9Q9HAQ2 790 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 LMAN1LQ9HAT1 526 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 THG1LQ9NWX6 298 aaKnown RBP16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 HMGXB4Q9UGU5 601 aa16.12■□□□□ 0.17
SNRPA1-210ENST00000560383 PTPRDP23468 1912 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 GPR179Q6PRD1 2367 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 CLDN5O00501 218 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 CILPO75339 1184 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 CLSTN1O94985 981 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 MARSP56192 900 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 PAK1Q13153 545 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 ZNF268Q14587 947 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 CAMK4Q16566 473 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 DCAF17Q5H9S7 520 aaPredicted RBP16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 DGKKQ5KSL6 1271 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 TCERG1LQ5VWI1 586 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 TXNDC8Q6A555 127 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 KLHL10Q6JEL2 608 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 FAM35AQ86V20 835 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 SPEM1Q8N4L4 309 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 TTC39CQ8N584 583 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 MAB21L3Q8N8X9 362 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 WHAMMQ8TF30 809 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 TWNKQ96RR1 684 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 IL37Q9NZH6 218 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 SMG5Q9UPR3 1016 aaKnown RBP16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 CTNND2Q9UQB3 1225 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 ATP8B3O60423 1300 aa16.11■□□□□ 0.17
SNRPA1-210ENST00000560383 TNFRSF10BO14763 440 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 PFKLP17858 780 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 AVPR1AP37288 418 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 PPP3CCP48454 512 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 TSSK4Q6SA08 328 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 SYNPOQ8N3V7 929 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 GPR161Q8N6U8 529 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 USP13Q92995 863 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 SECISBP2LQ93073 1101 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 SMARCD1Q96GM5 515 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 HNRNPABQ99729 332 aaKnown RBP16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 NT5C1AQ9BXI3 368 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 CLSTN2Q9H4D0 955 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 CSNK1G1Q9HCP0 422 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 DMAP1Q9NPF5 467 aaPredicted RBP16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.1■□□□□ 0.171e-15■■■■■ 72.7
SNRPA1-210ENST00000560383 LMBRD1Q9NUN5 540 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 GTSE1Q9NYZ3 720 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 GCNT4Q9P109 453 aa16.1■□□□□ 0.17
SNRPA1-210ENST00000560383 HELZP42694 1942 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 ANAPC1Q9H1A4 1944 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 FAM92AA1XBS5 289 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 GNA14O95837 355 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 CXCL12P48061 93 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 SOX9P48436 509 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 FMO5P49326 533 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 CCINQ13939 588 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 GAS6Q14393 721 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 ITPRIPL2Q3MIP1 535 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 TXNDC11Q6PKC3 985 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 GPIHBP1Q8IV16 184 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 TRIM59Q8IWR1 403 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 KIAA2013Q8IYS2 634 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 NUP93Q8N1F7 819 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 C12orf29Q8N999 325 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 SLC2A14Q8TDB8 520 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 TATDN2Q93075 761 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 ZFYVE19Q96K21 471 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 KCNK16Q96T55 309 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 SMG9Q9H0W8 520 aaKnown RBP16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 TDP1Q9NUW8 608 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 COMMD8Q9NX08 183 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 NCDNQ9UBB6 729 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 CCL26Q9Y258 94 aa16.09■□□□□ 0.17
SNRPA1-210ENST00000560383 CEP250Q9BV73 2442 aa16.08■□□□□ 0.17
SNRPA1-210ENST00000560383 ZNF840PA6NDX5 716 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 P4HA2O15460 535 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 RTN3O95197 1032 aaPredicted RBP16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 CCDC130P13994 396 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 TCF3P15923 654 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 TRIM21P19474 475 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 STX17P56962 302 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 ORC1Q13415 861 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 CCDC40Q4G0X9 1142 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 MLKLQ8NB16 471 aa16.08■□□□□ 0.16
SNRPA1-210ENST00000560383 ZMIZ2Q8NF64 920 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms