RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZNF852Q6ZMS4 543 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 TPRG1Q6ZUI0 275 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 YAF2Q8IY57 180 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 SLC4A11Q8NBS3 891 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 FAM122AQ96E09 287 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 SRRTQ9BXP5 876 aaKnown RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 C8orf33Q9H7E9 229 aaPredicted RBP14.01□□□□□ -0.17
SMAD3-213ENST00000560175 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.01□□□□□ -0.173e-6■■■■■ 85.7
SMAD3-213ENST00000560175 CISHQ9NSE2 258 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 TRPM5Q9NZQ8 1165 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 ARHGAP26Q9UNA1 814 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 FANCMQ8IYD8 2048 aa14.01□□□□□ -0.17
SMAD3-213ENST00000560175 TRAV19A0A0A6YYK7 116 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 FAM170BA6NMN3 283 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 STK25O00506 426 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 AP1G2O75843 785 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 DCNP07585 359 aaKnown RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 HDCP19113 662 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 CD72P21854 359 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 TARSP26639 723 aaKnown RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 PDE6CP51160 858 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 STX17P56962 302 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 USP4Q13107 963 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ORC1Q13415 861 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 CUL2Q13617 745 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ZNF77Q15935 545 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ARHGAP17Q68EM7 881 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 CLEC20AQ6ZU45 233 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 RALGPS2Q86X27 583 aaPredicted RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 IRF2BP1Q8IU81 584 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ZNF276Q8N554 614 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ARL14EPQ8N8R7 260 aaPredicted RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 PDZD8Q8NEN9 1154 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 SCAMP5Q8TAC9 235 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 TMEM176AQ96HP8 235 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 IPO9Q96P70 1041 aaKnown RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 SLITRK1Q96PX8 696 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 ARID3AQ99856 593 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 UBXN6Q9BZV1 441 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 RNF38Q9H0F5 515 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 GKN1Q9NS71 199 aa14□□□□□ -0.17
SMAD3-213ENST00000560175 THG1LQ9NWX6 298 aaKnown RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 MRPS17Q9Y2R5 130 aaKnown RBP14□□□□□ -0.17
SMAD3-213ENST00000560175 USP34Q70CQ2 3546 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 PROB1E7EW31 1015 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 FGFR1OPO95684 399 aaKnown RBP13.99□□□□□ -0.17
SMAD3-213ENST00000560175 CD58P19256 250 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 TRIM21P19474 475 aaKnown RBP13.99□□□□□ -0.17
SMAD3-213ENST00000560175 TUBP50607 506 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 SLC5A3P53794 718 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 KCNH2Q12809 1159 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 CCDC40Q4G0X9 1142 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 PPP1R26Q5T8A7 1209 aaPredicted RBP13.99□□□□□ -0.17
SMAD3-213ENST00000560175 CHFRQ96EP1 664 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 ZFYVE19Q96K21 471 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 MED10Q9BTT4 135 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 DNAI2Q9GZS0 605 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 HPS4Q9NQG7 708 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 FAM49BQ9NUQ9 324 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 GTSE1Q9NYZ3 720 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 USP3Q9Y6I4 520 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 PIAS3Q9Y6X2 628 aa13.99□□□□□ -0.17
SMAD3-213ENST00000560175 VPS13AQ96RL7 3174 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 OTOL1A6NHN0 477 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 NCAM2O15394 837 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 FAM200BP0CF97 657 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 CHRNB1P11230 501 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 ACO1P21399 889 aaKnown RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 TBXAS1P24557 533 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 HOXD11P31277 338 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 CTHP32929 405 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 MAP3K7CLP57077 242 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 RUNX3Q13761 415 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 PDGFRLQ15198 375 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 CT47A1Q5JQC4 288 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 SMYD5Q6GMV2 418 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 RBM43Q6ZSC3 357 aaKnown RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 C1orf210Q8IVY1 113 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 MAML2Q8IZL2 1156 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 EHBP1Q8NDI1 1231 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 CSGALNACT1Q8TDX6 532 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 FAM3CQ92520 227 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 FBXO44Q9H4M3 255 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 CHORDC1Q9UHD1 332 aaPredicted RBP13.98□□□□□ -0.17
SMAD3-213ENST00000560175 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 SCML2Q9UQR0 700 aa13.98□□□□□ -0.17
SMAD3-213ENST00000560175 SPECC1L-ADORA2AF8WAN1 911 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 H0Y858 1186 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 CLSTN1O94985 981 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 CKMP06732 381 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 CCDC192P0DO97 292 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 ERCC5P28715 1186 aaPredicted RBP13.97□□□□□ -0.17
SMAD3-213ENST00000560175 PGFP49763 221 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 KIF11P52732 1056 aa13.97□□□□□ -0.17
SMAD3-213ENST00000560175 GCNT1Q02742 428 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms