RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 RHOT2Q8IXI1 618 aa19.95■□□□□ 0.78
SEMA4B-215ENST00000560089 SPATA17Q96L03 361 aa19.95■□□□□ 0.78
SEMA4B-215ENST00000560089 CLK4Q9HAZ1 481 aaKnown RBP19.95■□□□□ 0.78
SEMA4B-215ENST00000560089 TAS2R14Q9NYV8 317 aa19.95■□□□□ 0.78
SEMA4B-215ENST00000560089 VPS51Q9UID3 782 aa19.95■□□□□ 0.78
SEMA4B-215ENST00000560089 ANKRD62A6NC57 917 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 PIK3CDO00329 1044 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 VDRP11473 427 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 YWHAGP61981 247 aaKnown RBP eCLIP19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 DCAF17Q5H9S7 520 aaPredicted RBP19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 DACT2Q5SW24 774 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 C12orf60Q5U649 245 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 CCDC124Q96CT7 223 aaKnown RBP19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 NUF2Q9BZD4 464 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 VPS11Q9H270 941 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 SIAEQ9HAT2 523 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 DDX4Q9NQI0 724 aaKnown RBP19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 SCINQ9Y6U3 715 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 TIMM44O43615 452 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 LARGE2Q8N3Y3 721 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 TSPAN14Q8NG11 270 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 PPP1R14CQ8TAE6 165 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 OLIG1Q8TAK6 271 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 TCP10LQ8TDR4 215 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 RANBP9Q96S59 729 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 FGFBP2Q9BYJ0 223 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 SOX13Q9UN79 622 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 XPO1O14980 1071 aaKnown RBP19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 ESRRBO95718 433 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 RRM1P23921 792 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 HSD17B4P51659 736 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 KCNC4Q03721 635 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 THAP11Q96EK4 314 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 SGF29Q96ES7 293 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 PNMA5Q96PV4 448 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 QPCTLQ9NXS2 382 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 NCKIPSDQ9NZQ3 722 aa19.94■□□□□ 0.78
SEMA4B-215ENST00000560089 TSPY2A6NKD2 308 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 M0R2N6 131 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 TCP10Q12799 353 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 NFIAQ12857 509 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SF3B4Q15427 424 aaKnown RBP eCLIP19.93■□□□□ 0.786e-8■■■■■ 28
SEMA4B-215ENST00000560089 PTCD2Q8WV60 388 aaKnown RBP19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 NUDT12Q9BQG2 462 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 WNT8AQ9H1J5 351 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 C1orf21Q9H246 121 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SIX2Q9NPC8 291 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 PIM2Q9P1W9 311 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 GAKO14976 1311 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 A0A1B0GTW7 788 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 USP17L3A6NCW0 530 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 USP17L4A6NCW7 530 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 CLDN3O15551 220 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 KCNA2P16389 499 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 MXI1P50539 228 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SLC25A3Q00325 362 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 CYP2A13Q16696 494 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 EDRF1Q3B7T1 1238 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SYDE1Q6ZW31 735 aaPredicted RBP19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 USP17L1Q7RTZ2 530 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 ANKMY2Q8IV38 441 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 RAVER1Q8IY67 606 aaKnown RBP19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 TRPC4APQ8TEL6 797 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 ATG4AQ8WYN0 398 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 RAD54LQ92698 747 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 CTRCQ99895 268 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 MKNK2Q9HBH9 465 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SAYSD1Q9NPB0 183 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 GCNT4Q9P109 453 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SLC17A7Q9P2U7 560 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 BCS1LQ9Y276 419 aa19.93■□□□□ 0.78
SEMA4B-215ENST00000560089 SNED1Q8TER0 1413 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 TNFAIP3P21580 790 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 CRKP46108 304 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 PDK1Q15118 436 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 CENPUQ71F23 418 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 SLC43A3Q8NBI5 491 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 UNKQ9C0B0 810 aaKnown RBP19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 CHST7Q9NS84 486 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 KLHL3Q9UH77 587 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 EMSYQ7Z589 1322 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 SIN3BO75182 1162 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 FBXO21O94952 628 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 NR2F2P24468 414 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 TUBA4AP68366 448 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 EPHA7Q15375 998 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 RGS21Q2M5E4 152 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 C6orf52Q5T4I8 152 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 RELL1Q8IUW5 271 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 ZFPM1Q8IX07 1006 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 TTC39CQ8N584 583 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 TTC13Q8NBP0 860 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 SH3GLB2Q9NR46 395 aa19.92■□□□□ 0.78
SEMA4B-215ENST00000560089 CCNT2O60583 730 aaKnown RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 SORBS2O94875 1100 aaKnown RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 TFAP4Q01664 338 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 APOBEC3HQ6NTF7 200 aaKnown RBP19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 CDC42EP5Q6NZY7 148 aa19.91■□□□□ 0.78
SEMA4B-215ENST00000560089 VPS37BQ9H9H4 285 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms