RNA–Protein interactions for RNA: ENST00000559898.5

HDDC3-205, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,024 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-205ENST00000559898 WBP2Q969T9 261 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 MSANTD3Q96H12 275 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 SMOQ99835 787 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 HINFPQ9BQA5 517 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 EPC1Q9H2F5 836 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 ECT2Q9H8V3 914 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 FAM49BQ9NUQ9 324 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 SMPD4Q9NXE4 827 aa18.86■□□□□ 0.61
HDDC3-205ENST00000559898 SMG5Q9UPR3 1016 aaKnown RBP18.86■□□□□ 0.61
HDDC3-205ENST00000559898 SOBPA7XYQ1 873 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 LEFTY2O00292 366 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 TRDMT1O14717 391 aaKnown RBP18.85■□□□□ 0.61
HDDC3-205ENST00000559898 HRO43593 1189 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 ASS1P00966 412 aaKnown RBP18.85■□□□□ 0.61
HDDC3-205ENST00000559898 MESP2Q0VG99 397 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 KCNB1Q14721 858 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 DGKKQ5KSL6 1271 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 SFTPA1Q8IWL2 248 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 GUF1Q8N442 669 aaKnown RBP18.85■□□□□ 0.61
HDDC3-205ENST00000559898 ENGASEQ8NFI3 743 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 RUBCNQ92622 972 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 MED10Q9BTT4 135 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 ELOVL4Q9GZR5 314 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 TRPM5Q9NZQ8 1165 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 CHORDC1Q9UHD1 332 aaPredicted RBP18.85■□□□□ 0.61
HDDC3-205ENST00000559898 ZMYM5Q9UJ78 669 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 ARHGAP26Q9UNA1 814 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 CPQQ9Y646 472 aa18.85■□□□□ 0.61
HDDC3-205ENST00000559898 OAS1P00973 400 aaKnown RBP18.84■□□□□ 0.61
HDDC3-205ENST00000559898 PIK3CAP42336 1068 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 AP3M2P53677 418 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
HDDC3-205ENST00000559898 NFIL3Q16649 462 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 SGSM1Q2NKQ1 1148 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 CC2D1AQ6P1N0 951 aaPredicted RBP18.84■□□□□ 0.61
HDDC3-205ENST00000559898 GPRIN1Q7Z2K8 1008 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 FAM186BQ8IYM0 893 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 SLC2A14Q8TDB8 520 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 WHAMMQ8TF30 809 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 RMDN1Q96DB5 314 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 PARD6AQ9NPB6 346 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 KRT82Q9NSB4 513 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 FRMD4BQ9Y2L6 1034 aa18.84■□□□□ 0.61
HDDC3-205ENST00000559898 RNF40O75150 1001 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 AP1G2O75843 785 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 OLFM2O95897 454 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 TGM1P22735 817 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 PRCPP42785 496 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 IFNAR2P48551 515 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 SLC5A3P53794 718 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 ADAM9Q13443 819 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 PDGFRLQ15198 375 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 NUP93Q8N1F7 819 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 FBXO32Q969P5 355 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 ZFRQ96KR1 1074 aaKnown RBP18.83■□□□□ 0.6
HDDC3-205ENST00000559898 CCSER2Q9H7U1 834 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 GMIPQ9P107 970 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 ATP6V1DQ9Y5K8 247 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 DNAH14Q0VDD8 3507 aa18.83■□□□□ 0.6
HDDC3-205ENST00000559898 IKBKBO14920 756 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 TCF3P15923 654 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 CD58P19256 250 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 YWHAQP27348 245 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 ADORA2BP29275 332 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 OPRD1P41143 372 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 MAP3K7CLP57077 242 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 SLC7A9P82251 487 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 ISM2Q6H9L7 571 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 FILIP1Q7Z7B0 1213 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 JAKMIP2Q96AA8 810 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 P2RY13Q9BPV8 354 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 IER2Q9BTL4 223 aa18.82■□□□□ 0.6
HDDC3-205ENST00000559898 TRIM49BA6NDI0 452 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 HHLA1C9JL84 531 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 MAPK13O15264 365 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 COCHO43405 550 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 PAPSS2O95340 614 aaPredicted RBP18.81■□□□□ 0.6
HDDC3-205ENST00000559898 CYP17A1P05093 508 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 ID4P47928 161 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 SLC6A11P48066 632 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 C1orf228Q6PIY5 440 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 PRR23BQ6ZRT6 265 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 C12orf40Q86WS4 652 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 CRYBG2Q8N1P7 616 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 CPA6Q8N4T0 437 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 CEP295NLQ96MC4 621 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 ARID3AQ99856 593 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 IL37Q9NZH6 218 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 CFAP97Q9P2B7 532 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 NCDNQ9UBB6 729 aa18.81■□□□□ 0.6
HDDC3-205ENST00000559898 MBL2P11226 248 aaPredicted RBP18.8■□□□□ 0.6
HDDC3-205ENST00000559898 PSMC2P35998 433 aaKnown RBP18.8■□□□□ 0.6
HDDC3-205ENST00000559898 GRSF1Q12849 480 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDDC3-205ENST00000559898 CD101Q93033 1021 aa18.8■□□□□ 0.6
HDDC3-205ENST00000559898 TATDN2Q93075 761 aa18.8■□□□□ 0.6
HDDC3-205ENST00000559898 ATP2A3Q93084 1043 aa18.8■□□□□ 0.6
HDDC3-205ENST00000559898 CCDC47Q96A33 483 aaKnown RBP18.8■□□□□ 0.6
HDDC3-205ENST00000559898 SMARCD1Q96GM5 515 aa18.8■□□□□ 0.6
HDDC3-205ENST00000559898 FAM126AQ9BYI3 521 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms