RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 NT5C1AQ9BXI3 368 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 LMAN1LQ9HAT1 526 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 GKN1Q9NS71 199 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 RAB20Q9NX57 234 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 GCNT4Q9P109 453 aa13.36□□□□□ -0.27
LRRC28-214ENST00000559433 WDR87Q6ZQQ6 2873 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 BICDL2A1A5D9 508 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 ZNF840PA6NDX5 716 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 PPP1R3GB7ZBB8 358 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 PROB1E7EW31 1015 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 SPECC1L-ADORA2AF8WAN1 911 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 RTN3O95197 1032 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-214ENST00000559433 ABL1P00519 1130 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 SP9P0CG40 484 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 HDCP19113 662 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 YWHAQP27348 245 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 ADORA2BP29275 332 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 RPS9P46781 194 aaKnown RBP13.35□□□□□ -0.27
LRRC28-214ENST00000559433 PPP3CCP48454 512 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 SLC5A3P53794 718 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 TAF10Q12962 218 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 LRRC32Q14392 662 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 MTF1Q14872 753 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 ITPRIPL2Q3MIP1 535 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 CCDC40Q4G0X9 1142 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 CBWD6Q4V339 395 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 CBWD3Q5JTY5 395 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 CBWD5Q5RIA9 395 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 RIN3Q8TB24 985 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 ATRIPQ8WXE1 791 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 EXOC4Q96A65 974 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 CLDN23Q96B33 292 aa13.35□□□□□ -0.27
LRRC28-214ENST00000559433 DUSP9Q99956 384 aaKnown RBP13.35□□□□□ -0.27
LRRC28-214ENST00000559433 METTL14Q9HCE5 456 aaKnown RBP13.35□□□□□ -0.27
LRRC28-214ENST00000559433 FANCMQ8IYD8 2048 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 CILPO75339 1184 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 FAM200BP0CF97 657 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 PFKLP17858 780 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 CTHP32929 405 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 MAP3K7CLP57077 242 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 USP4Q13107 963 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 PAK1Q13153 545 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 ZNF77Q15935 545 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 CAMK4Q16566 473 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 TRIM68Q6AZZ1 485 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 TTI2Q6NXR4 508 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 RALGPS2Q86X27 583 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-214ENST00000559433 ZNF687Q8N1G0 1237 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 PDZD8Q8NEN9 1154 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 SCAMP5Q8TAC9 235 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 SLC35C1Q96A29 364 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 SMOQ99835 787 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 FAM83CQ9BQN1 747 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 EBF3Q9H4W6 596 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 FBXO4Q9UKT5 387 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 ARHGAP26Q9UNA1 814 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 MYO15AQ9UKN7 3530 aa13.34□□□□□ -0.27
LRRC28-214ENST00000559433 TNFRSF10BO14763 440 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 BEST1O76090 585 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 LMNAP02545 664 aaKnown RBP13.33□□□□□ -0.28
LRRC28-214ENST00000559433 ARSAP15289 507 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 NRLP54845 237 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 STX17P56962 302 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 NR1H3Q13133 447 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 FZD5Q13467 585 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 RUNX3Q13761 415 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 ZNF528Q3MIS6 628 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 DGKKQ5KSL6 1271 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 TXNDC11Q6PKC3 985 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 FILIP1Q7Z7B0 1213 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 TTC39CQ8N584 583 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 ZMIZ2Q8NF64 920 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 SH3RF2Q8TEC5 729 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 WHAMMQ8TF30 809 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 OVCA2Q8WZ82 227 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 TATDN2Q93075 761 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 JAKMIP2Q96AA8 810 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 CYFIP2Q96F07 1278 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 FAXDC2Q96IV6 333 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 HNRNPABQ99729 332 aaKnown RBP13.33□□□□□ -0.28
LRRC28-214ENST00000559433 ARID3AQ99856 593 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 IER2Q9BTL4 223 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 CSNK1G1Q9HCP0 422 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 HPS4Q9NQG7 708 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 CISHQ9NSE2 258 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 DUS2Q9NX74 493 aaKnown RBP13.33□□□□□ -0.28
LRRC28-214ENST00000559433 KIAA1468Q9P260 1216 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 COQ4Q9Y3A0 265 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 R4GN57 208 aa13.33□□□□□ -0.28
LRRC28-214ENST00000559433 LEFTY2O00292 366 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 OAS1P00973 400 aaKnown RBP13.32□□□□□ -0.28
LRRC28-214ENST00000559433 TCF3P15923 654 aa13.32□□□□□ -0.28
LRRC28-214ENST00000559433 IFNAR2P48551 515 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms