RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 ZC3H3Q8IXZ2 948 aaKnown RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 CRYBG2Q8N1P7 616 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 TRIML1Q8N9V2 468 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 PDZD8Q8NEN9 1154 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 SH3RF2Q8TEC5 729 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 TATDN2Q93075 761 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 SLC35C1Q96A29 364 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 CYFIP2Q96F07 1278 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 MSANTD3Q96H12 275 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 HEXIM2Q96MH2 286 aaKnown RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 SMOQ99835 787 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 ARID3AQ99856 593 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 DUSP9Q99956 384 aaKnown RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 TTLL2Q9BWV7 592 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 OSBPL6Q9BZF3 934 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 NACA2Q9H009 215 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 EBF3Q9H4W6 596 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 C8orf33Q9H7E9 229 aaPredicted RBP8.68□□□□□ -1.02
SNX1-207ENST00000559401 CISHQ9NSE2 258 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 SMPD4Q9NXE4 827 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 DLGAP2Q9P1A6 1054 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 KIAA1468Q9P260 1216 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 CPQQ9Y646 472 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 WNT6Q9Y6F9 365 aa8.68□□□□□ -1.02
SNX1-207ENST00000559401 ZNF840PA6NDX5 716 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 ARNTLO00327 626 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 SCAMP3O14828 347 aaKnown RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 BEST1O76090 585 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 FGFR1OPO95684 399 aaKnown RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 ARSAP15289 507 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 CTHP32929 405 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 MAGEA9P43362 315 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 FMO5P49326 533 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 YWHAEP62258 255 aaKnown RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 CETN1Q12798 172 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 USP4Q13107 963 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 CUL2Q13617 745 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 RUNX3Q13761 415 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 LRRC32Q14392 662 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 PON2Q15165 354 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 PDGFRLQ15198 375 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 ZNF77Q15935 545 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 TPD52L1Q16890 204 aaPredicted RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 C1orf228Q6PIY5 440 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 PAQR9Q6ZVX9 377 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 C1orf210Q8IVY1 113 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 CPA6Q8N4T0 437 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 TTC39CQ8N584 583 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 SCAMP5Q8TAC9 235 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 RIN3Q8TB24 985 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 NT5C1BQ96P26 610 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 SRRTQ9BXP5 876 aaKnown RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 NUP62CLQ9H1M0 184 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 LMAN1LQ9HAT1 526 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 DUS2Q9NX74 493 aaKnown RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 GMIPQ9P107 970 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 GCNT4Q9P109 453 aa8.67□□□□□ -1.02
SNX1-207ENST00000559401 CHORDC1Q9UHD1 332 aaPredicted RBP8.67□□□□□ -1.02
SNX1-207ENST00000559401 LEFTY2O00292 366 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 GNA14O95837 355 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CCDC192P0DO97 292 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CD19P15391 556 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 PFKLP17858 780 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 ACO1P21399 889 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 TBXAS1P24557 533 aaPredicted RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 HOXD11P31277 338 aaPredicted RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 RPS9P46781 194 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 SLC8A3P57103 927 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 AMPD2Q01433 879 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CSTF1Q05048 431 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 HECTD3Q5T447 861 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 PPP1R26Q5T8A7 1209 aaPredicted RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 ZC3H14Q6PJT7 736 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 TXNDC11Q6PKC3 985 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CLEC20AQ6ZU45 233 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 PPM1KQ8N3J5 372 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 ZMIZ2Q8NF64 920 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 WHAMMQ8TF30 809 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 OSCP1Q8WVF1 389 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 OVCA2Q8WZ82 227 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 ATP2A3Q93084 1043 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CLDN23Q96B33 292 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 TMEM176AQ96HP8 235 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 GBP4Q96PP9 640 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 HNRNPABQ99729 332 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 FAM83CQ9BQN1 747 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CLSTN2Q9H4D0 955 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 FBXO44Q9H4M3 255 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 CCSER2Q9H7U1 834 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 HPS4Q9NQG7 708 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 TLR8Q9NR97 1041 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 RBM12Q9NTZ6 932 aaKnown RBP8.66□□□□□ -1.02
SNX1-207ENST00000559401 CFAP97Q9P2B7 532 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 ARHGAP26Q9UNA1 814 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 COQ4Q9Y3A0 265 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.66□□□□□ -1.02
SNX1-207ENST00000559401 R4GN57 208 aa8.66□□□□□ -1.02
SNX1-207ENST00000559401 SHISA7A6NL88 538 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 GOLGA6L22H0YM25 854 aa8.65□□□□□ -1.02
SNX1-207ENST00000559401 TNFRSF10BO14763 440 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms