RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 MRPS17Q9Y2R5 130 aaKnown RBP11.62□□□□□ -0.55
SPG11-216ENST00000559347 COQ4Q9Y3A0 265 aa11.62□□□□□ -0.55
SPG11-216ENST00000559347 BICDL2A1A5D9 508 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 SPECC1L-ADORA2AF8WAN1 911 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 BEST1O76090 585 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 RTN3O95197 1032 aaPredicted RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 OLFM2O95897 454 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 OAS1P00973 400 aaKnown RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 TCF3P15923 654 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 PFKLP17858 780 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 TRIM21P19474 475 aaKnown RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 CTHP32929 405 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 NBL1P41271 181 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 MRE11P49959 708 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 PDE6CP51160 858 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 PAK1Q13153 545 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 FZD5Q13467 585 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 C1orf228Q6PIY5 440 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 TXNDC11Q6PKC3 985 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 C1orf210Q8IVY1 113 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 NUP93Q8N1F7 819 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 ARL14EPQ8N8R7 260 aaPredicted RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 C12orf29Q8N999 325 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 TRIML1Q8N9V2 468 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 OVCA2Q8WZ82 227 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 FAM3CQ92520 227 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 SLITRK1Q96PX8 696 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 CYP2S1Q96SQ9 504 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 SMOQ99835 787 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 FAM83CQ9BQN1 747 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 NT5C1AQ9BXI3 368 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 C8orf33Q9H7E9 229 aaPredicted RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 HPS4Q9NQG7 708 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 THG1LQ9NWX6 298 aaKnown RBP11.61□□□□□ -0.55
SPG11-216ENST00000559347 TRPM5Q9NZQ8 1165 aa11.61□□□□□ -0.55
SPG11-216ENST00000559347 FAM92AA1XBS5 289 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 ZNF840PA6NDX5 716 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 NCAM2O15394 837 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 ADORA2BP29275 332 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 PPP3CCP48454 512 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 FMO5P49326 533 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 KPNA1P52294 538 aaPredicted RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 TAF10Q12962 218 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 MTF1Q14872 753 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 CAMK4Q16566 473 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 ITPRIPL2Q3MIP1 535 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 CCDC40Q4G0X9 1142 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 TRIM68Q6AZZ1 485 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 CLEC20AQ6ZU45 233 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 FRMD5Q7Z6J6 570 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 FILIP1Q7Z7B0 1213 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 ALYREFQ86V81 257 aaKnown RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 RALGPS2Q86X27 583 aaPredicted RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 MAML2Q8IZL2 1156 aaPredicted RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 PDZD8Q8NEN9 1154 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 TTC8Q8TAM2 541 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 FBXO32Q969P5 355 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 CHFRQ96EP1 664 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 CHRDQ9H2X0 955 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 EBF3Q9H4W6 596 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 FAM124BQ9H5Z6 455 aaPredicted RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 METTL14Q9HCE5 456 aaKnown RBP11.6□□□□□ -0.55
SPG11-216ENST00000559347 CISHQ9NSE2 258 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 IL37Q9NZH6 218 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 KIAA1468Q9P260 1216 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 ARHGAP26Q9UNA1 814 aa11.6□□□□□ -0.55
SPG11-216ENST00000559347 DMXL1Q9Y485 3027 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 PROB1E7EW31 1015 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 FAM200BP0CF97 657 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 ARSAP15289 507 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 HDCP19113 662 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 YWHAQP27348 245 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 MARSP56192 900 aaKnown RBP11.59□□□□□ -0.55
SPG11-216ENST00000559347 STX17P56962 302 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 MAP3K7CLP57077 242 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 SLC7A9P82251 487 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 ZXDBP98169 803 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 RUNX3Q13761 415 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 ZNF394Q53GI3 561 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 CLEC17AQ6ZS10 378 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 GPRIN1Q7Z2K8 1008 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 TTC39CQ8N584 583 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 SLC4A11Q8NBS3 891 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 SCAMP5Q8TAC9 235 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 SH3RF2Q8TEC5 729 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 OSCP1Q8WVF1 389 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 TATDN2Q93075 761 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 CYFIP2Q96F07 1278 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 PRMT8Q9NR22 394 aaPredicted RBP11.59□□□□□ -0.55
SPG11-216ENST00000559347 GKN1Q9NS71 199 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 SPATA6Q9NWH7 488 aaPredicted RBP11.59□□□□□ -0.55
SPG11-216ENST00000559347 COMMD8Q9NX08 183 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 FARP1Q9Y4F1 1045 aaPredicted RBP11.59□□□□□ -0.55
SPG11-216ENST00000559347 ZNF292O60281 2723 aa11.59□□□□□ -0.55
SPG11-216ENST00000559347 ZFHX2Q9C0A1 2572 aaPredicted RBP11.59□□□□□ -0.55
SPG11-216ENST00000559347 MYOFQ9NZM1 2061 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
SPG11-216ENST00000559347 OTOL1A6NHN0 477 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms