RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CYTH4Q9UIA0 394 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 MYO6Q9UM54 1294 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 USP15Q9Y4E8 981 aaPredicted RBP13.12□□□□□ -0.31
GABPB1-208ENST00000558970 CEP83Q9Y592 693 aa13.12□□□□□ -0.31
GABPB1-208ENST00000558970 TCF20Q9UGU0 1960 aaKnown RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 A0A1W2PRU2 124 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 GRXCR2A6NFK2 248 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 HHLA1C9JL84 531 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 NRG2O14511 850 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 XPO1O14980 1071 aaKnown RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 C1RP00736 705 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 RHOP08100 348 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 SETSIPP0DME0 302 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CSH1P0DML2 217 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CSH2P0DML3 217 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 TNFAIP3P21580 790 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 GABRR2P28476 465 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 HOXA9P31269 272 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CYP4F8P98187 520 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 ARID5BQ14865 1188 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 COL19A1Q14993 1142 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 SLC5A9Q2M3M2 681 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 TSR1Q2NL82 804 aaKnown RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 NAA35Q5VZE5 725 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 PDZD4Q76G19 769 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 ZNF571Q7Z3V5 609 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 GPR149Q86SP6 731 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CNGA4Q8IV77 575 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 SMRP1Q8NCR6 262 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 ST13P5Q8NFI4 369 aaPredicted RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 ADAMTS19Q8TE59 1207 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 CLEC4CQ8WTT0 213 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 NDRG1Q92597 394 aaKnown RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 PSMG2Q969U7 264 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 TCEAL4Q96EI5 215 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 PCDHB18PQ96TA0 734 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 NUCKS1Q9H1E3 243 aaKnown RBP13.11□□□□□ -0.31
GABPB1-208ENST00000558970 S1PR5Q9H228 398 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 ADAM7Q9H2U9 754 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 LRRC4Q9HBW1 653 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 AIPL1Q9NZN9 384 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 TJP2Q9UDY2 1190 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 PCDHGC3Q9UN70 934 aa13.11□□□□□ -0.31
GABPB1-208ENST00000558970 BRWD1Q9NSI6 2320 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TNFRSF10BO14763 440 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 USP17L7P0C7H9 530 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 HMGA1P17096 107 aaKnown RBP13.1□□□□□ -0.31
GABPB1-208ENST00000558970 CDC25BP30305 580 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 CCR2P41597 374 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 GPD2P43304 727 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 PLA2G4AP47712 749 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 KCNQ1P51787 676 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TKTL1P51854 596 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ITIH3Q06033 890 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TAF10Q12962 218 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 PDCLQ13371 301 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 PKDCCQ504Y2 493 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ATAT1Q5SQI0 421 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 CYP4A22Q5TCH4 519 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 HGSNATQ68CP4 663 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 PHLDB2Q86SQ0 1253 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TMC8Q8IU68 726 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SIX6OS1Q8N1H7 587 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 WDTC1Q8N5D0 677 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TC2NQ8N9U0 490 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 CMASQ8NFW8 434 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-208ENST00000558970 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SLC30A5Q8TAD4 765 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SLC35F5Q8WV83 523 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SPATA17Q96L03 361 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 UHRF1Q96T88 793 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ULBP1Q9BZM6 244 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ATXN3LQ9H3M9 355 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 POMKQ9H5K3 350 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SLITRK6Q9H5Y7 841 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 SYNCQ9H7C4 482 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 TRPC7Q9HCX4 862 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ZNHIT6Q9NWK9 470 aaKnown RBP13.1□□□□□ -0.31
GABPB1-208ENST00000558970 ASB3Q9Y575 518 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
GABPB1-208ENST00000558970 CLUHO75153 1309 aa13.1□□□□□ -0.31
GABPB1-208ENST00000558970 E5RJQ4 531 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 MBTPS2O43462 519 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 SERPING1P05155 500 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 CEBPBP17676 345 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 YWHAQP27348 245 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 EIF4A3P38919 411 aaKnown RBP13.09□□□□□ -0.31
GABPB1-208ENST00000558970 NOMO3P69849 1222 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 CBX2Q14781 532 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-208ENST00000558970 TEAD2Q15562 447 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 STXBP5Q5T5C0 1151 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 PTCRAQ6ISU1 281 aaPredicted RBP13.09□□□□□ -0.31
GABPB1-208ENST00000558970 WDR59Q6PJI9 974 aa13.09□□□□□ -0.31
GABPB1-208ENST00000558970 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms