RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 NUMBLQ9Y6R0 609 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 PTPRDP23468 1912 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 GABRDO14764 452 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 HUS1O60921 280 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 AKAP3O75969 853 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 ATF6P18850 670 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 ACAT1P24752 427 aaKnown RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 DLG4P78352 724 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYO1EQ12965 1108 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 NFIL3Q16649 462 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 C1orf220Q5T0J3 134 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 SAMD5Q5TGI4 173 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 PARM1Q6UWI2 310 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 TMEM86AQ8N2M4 240 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 SLC44A3Q8N4M1 653 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 SPATA18Q8TC71 538 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 NXPE3Q969Y0 559 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 CCDC34Q96HJ3 373 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 TIGD1Q96MW7 591 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 GSDMAQ96QA5 445 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 RPP25Q9BUL9 199 aaKnown RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 XYLT2Q9H1B5 865 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZNF334Q9HCZ1 680 aaPredicted RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 DDX43Q9NXZ2 648 aaKnown RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 ABI2Q9NYB9 513 aaPredicted RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 HSFX1Q9UBD0 423 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 NME7Q9Y5B8 376 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 PCDHA5Q9Y5H7 936 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZFP37Q9Y6Q3 630 aaPredicted RBP6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 F5P12259 2224 aa6.45□□□□□ -1.38
CTDSPL2-204ENST00000558966 PIEZO1Q92508 2521 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 OBSL1O75147 1896 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 DENND4CQ5VZ89 1909 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 EREGO14944 169 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 KHNYNO15037 678 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ATXN7O15265 892 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 CALUO43852 315 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 SASH3O75995 380 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 KIF20AO95235 890 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 VNN1O95497 513 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 C4BPAP04003 597 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 GJA1P17302 382 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 FCARP24071 287 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 NR2F2P24468 414 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 EPHB3P54753 998 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYL6P60660 151 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 TSPY1Q01534 308 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 PLD1Q13393 1074 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 CEP135Q66GS9 1140 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 IQCEQ6IPM2 695 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 DPH6Q7L8W6 267 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 DCP1BQ8IZD4 617 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ELMOD1Q8N336 334 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 FBXL6Q8N531 539 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 SHKBP1Q8TBC3 707 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 SPPL2BQ8TCT7 592 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 C2orf15Q8WU43 125 aaKnown RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 PSMG2Q969U7 264 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ELMO3Q96BJ8 720 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 MCRS1Q96EZ8 462 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZNF512Q96ME7 567 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 SEPT5Q99719 369 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 LPIN3Q9BQK8 851 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ACBD6Q9BR61 282 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 CHRDQ9H2X0 955 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 NPHS2Q9NP85 383 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 ASAH2Q9NR71 780 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 CUEDC1Q9NWM3 386 aaPredicted RBP6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 RMND1Q9NWS8 449 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 GDE1Q9NZC3 331 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 CHMP5Q9NZZ3 219 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 GTF3C4Q9UKN8 822 aa6.44□□□□□ -1.38
CTDSPL2-204ENST00000558966 COL4A3Q01955 1670 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYBPHLA2RUH7 354 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ZNF197O14709 1029 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SCAMP3O14828 347 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MAPK13O15264 365 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ATP2C2O75185 946 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TRIM49P0CI25 452 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TRIM49CP0CI26 452 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 HAPLN1P10915 354 aaPredicted RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SRFP11831 508 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYL4P12829 197 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 WARSP23381 471 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 LMO2P25791 158 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PCSK1P29120 753 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PRCPP42785 496 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 ALDH1A3P47895 512 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 LHX1P48742 406 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TUFMP49411 452 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 GPR15P49685 360 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 PMS1P54277 932 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 VCPP55072 806 aaKnown RBP6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 MYL7Q01449 175 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 SMARCB1Q12824 385 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 BIRC3Q13489 604 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 TEAD2Q15562 447 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 EDRF1Q3B7T1 1238 aa6.43□□□□□ -1.38
CTDSPL2-204ENST00000558966 WDR72Q3MJ13 1102 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms