RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 BOD1Q96IK1 185 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 TBATAQ96M53 351 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 FAM227BQ96M60 508 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 CRAMP1Q96RY5 1269 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 PRPF18Q99633 342 aaKnown RBP5.16□□□□□ -1.58
CASC4-206ENST00000558847 PCDHAC1Q9H158 963 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 ZNF768Q9H5H4 540 aaKnown RBP5.16□□□□□ -1.58
CASC4-206ENST00000558847 SLC2A4RGQ9NR83 387 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 TRPM5Q9NZQ8 1165 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 DNMT3BQ9UBC3 853 aaKnown RBP5.16□□□□□ -1.58
CASC4-206ENST00000558847 HSFX1Q9UBD0 423 aa5.16□□□□□ -1.58
CASC4-206ENST00000558847 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
CASC4-206ENST00000558847 A0A0B4J269 797 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 MARCH11A6NNE9 402 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 SNX2O60749 519 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 RAMP2O60895 175 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 SUN1O94901 812 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 CFIP05156 583 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 NPPBP16860 134 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 CHRM3P20309 590 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 KCNA3P22001 575 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 NPTX2P47972 431 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 TOB1P50616 345 aaPredicted RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 ITGA8P53708 1063 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 CXADRP78310 365 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 OCA2Q04671 838 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 MYO1EQ12965 1108 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 TUBB3Q13509 450 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 PDCD4Q53EL6 469 aaKnown RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 ICE2Q659A1 982 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 SP5Q6BEB4 398 aaPredicted RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 TMPRSS9Q7Z410 1059 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 ZNF575Q86XF7 245 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 LDLRAD3Q86YD5 345 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 CCDC28AQ8IWP9 274 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 NRSN1Q8IZ57 195 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 CPT1CQ8TCG5 803 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 IPO4Q8TEX9 1081 aaKnown RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 ABHD5Q8WTS1 349 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 TBC1D20Q96BZ9 403 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 C18orf8Q96DM3 657 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 ZSCAN31Q96LW9 406 aaPredicted RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 KATNAL1Q9BW62 490 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 TEX101Q9BY14 249 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 TRIM5Q9C035 493 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 SLC25A32Q9H2D1 315 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 GALNT9Q9HCQ5 603 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 DNAJB11Q9UBS4 358 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.15□□□□□ -1.59
CASC4-206ENST00000558847 HERC5Q9UII4 1024 aaKnown RBP5.15□□□□□ -1.59
CASC4-206ENST00000558847 HPSEQ9Y251 543 aa5.15□□□□□ -1.59
CASC4-206ENST00000558847 A0A087WZ62 844 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 F5H697 171 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 PIP5K1BO14986 540 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ZNF185O15231 689 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 SRGAP2O75044 1071 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 VIPP01282 170 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 MST1P26927 711 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 EPHA3P29320 983 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ATICP31939 592 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 PDE6CP51160 858 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ZNF134P52741 427 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ALDH18A1P54886 795 aaKnown RBP5.14□□□□□ -1.59
CASC4-206ENST00000558847 GPS1Q13098 491 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 CCNIQ14094 377 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 BOP1Q14137 746 aaKnown RBP5.14□□□□□ -1.59
CASC4-206ENST00000558847 RALBP1Q15311 655 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ADCK5Q3MIX3 580 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 TEDDM1Q5T9Z0 273 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ATPAF1Q5TC12 328 aaPredicted RBP5.14□□□□□ -1.59
CASC4-206ENST00000558847 KLHL17Q6TDP4 642 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 RASGRP3Q8IV61 690 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ADGRG5Q8IZF4 528 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 TMEM132CQ8N3T6 1108 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 ZNF276Q8N554 614 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 SLC25A43Q8WUT9 341 aaPredicted RBP5.14□□□□□ -1.59
CASC4-206ENST00000558847 PPP2R3CQ969Q6 453 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 SAYSD1Q9NPB0 183 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 TMEM74BQ9NUR3 256 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 GRHPRQ9UBQ7 328 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 NDRG4Q9ULP0 352 aaKnown RBP5.14□□□□□ -1.59
CASC4-206ENST00000558847 LZTS1Q9Y250 596 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 GPR52Q9Y2T5 361 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 DTNAQ9Y4J8 743 aa5.14□□□□□ -1.59
CASC4-206ENST00000558847 OR2W5A6NFC9 320 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 M0R3H8 397 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 CD3EAPO15446 510 aaKnown RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 WDHD1O75717 1129 aaPredicted RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 CD53P19397 219 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 MTHFSP49914 203 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 BCAT1P54687 386 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 ATP1A4Q13733 1029 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 TAF12Q16514 161 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 RBM20Q5T481 1227 aaKnown RBP5.13□□□□□ -1.59
CASC4-206ENST00000558847 ARHGAP40Q5TG30 622 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 MMS22LQ6ZRQ5 1243 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 LRRC55Q6ZSA7 311 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 ZNF627Q7L945 461 aa5.13□□□□□ -1.59
CASC4-206ENST00000558847 CCDC117Q8IWD4 279 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms