RNA–Protein interactions for RNA: ENST00000558752.1

RPL28-206, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-206ENST00000558752 TRPC3Q13507 836 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 DMC1Q14565 340 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 MAPRE1Q15691 268 aaKnown RBP16.28■□□□□ 0.2
RPL28-206ENST00000558752 PLK5Q496M5 336 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 CFAP221Q4G0U5 840 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 RPLP0P6Q8NHW5 317 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 TMC2Q8TDI7 906 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 PARD3BQ8TEW8 1205 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 HHIPQ96QV1 700 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 LSM14BQ9BX40 385 aaKnown RBP16.28■□□□□ 0.2
RPL28-206ENST00000558752 L1RE1Q9UN81 338 aa16.28■□□□□ 0.2
RPL28-206ENST00000558752 OTOL1A6NHN0 477 aaPredicted RBP16.27■□□□□ 0.2
RPL28-206ENST00000558752 KCNK5O95279 499 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 NFATC1O95644 943 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 CAVIN2O95810 425 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 CST3P01034 146 aaPredicted RBP16.27■□□□□ 0.2
RPL28-206ENST00000558752 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 TCF3P15923 654 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 CYP2F1P24903 491 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 GBP1P32455 592 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 CREB5Q02930 508 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 CCDC6Q16204 474 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 DDR2Q16832 855 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 SOWAHAQ2M3V2 549 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 COBLL1Q53SF7 1204 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 LMBRD2Q68DH5 695 aaPredicted RBP16.27■□□□□ 0.2
RPL28-206ENST00000558752 SCN4BQ8IWT1 228 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 TSTD1Q8NFU3 115 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 SYAP1Q96A49 352 aaPredicted RBP16.27■□□□□ 0.2
RPL28-206ENST00000558752 VRTNQ9H8Y1 702 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 TMLHEQ9NVH6 421 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 GTF3C4Q9UKN8 822 aa16.27■□□□□ 0.2
RPL28-206ENST00000558752 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 PHACTR2O75167 634 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 TACC1O75410 805 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 HOXB3P14651 431 aaPredicted RBP16.26■□□□□ 0.19
RPL28-206ENST00000558752 HDCP19113 662 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 ANXA13P27216 316 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 MAGEA11P43364 429 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 PPP3CCP48454 512 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 GPR15P49685 360 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 DGKEP52429 567 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 ZNF77Q15935 545 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 VSTM1Q6UX27 236 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 ADGRF2Q8IZF7 708 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 KIAA1958Q8N8K9 716 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 SPATA20Q8TB22 786 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 ZNF516Q92618 1163 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 CHFRQ96EP1 664 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 EDEM2Q9BV94 578 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 DUSP15Q9H1R2 295 aaPredicted RBP16.26■□□□□ 0.19
RPL28-206ENST00000558752 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 MAGEC2Q9UBF1 373 aaPredicted RBP16.26■□□□□ 0.19
RPL28-206ENST00000558752 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
RPL28-206ENST00000558752 SLC9A3R1O14745 358 aaPredicted RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 KHNYNO15037 678 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 ALDH1A2O94788 518 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 C4BPAP04003 597 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 WARSP23381 471 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 ACAT1P24752 427 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 PPP1R2P41236 205 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 USP4Q13107 963 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 ADAM9Q13443 819 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 EML3Q32P44 896 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 EDRF1Q3B7T1 1238 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 ZNF658Q5TYW1 1059 aaPredicted RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 SDHAF4Q5VUM1 108 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 INTS8Q75QN2 995 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 TAF4BQ92750 862 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 MMS19Q96T76 1030 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 FBRSL1Q9HCM7 1045 aaKnown RBP16.25■□□□□ 0.19
RPL28-206ENST00000558752 TRPM5Q9NZQ8 1165 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 ARHGAP26Q9UNA1 814 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 WNT6Q9Y6F9 365 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 ATG2BQ96BY7 2078 aa16.25■□□□□ 0.19
RPL28-206ENST00000558752 BCLAF3A2AJT9 711 aaKnown RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 KRT13P13646 458 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 P4HA1P13674 534 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 NR2F2P24468 414 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 PSMC2P35998 433 aaKnown RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 GNL1P36915 607 aaPredicted RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 GRIK1P39086 918 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 TNNC1P63316 161 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 SGSM1Q2NKQ1 1148 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 WDR72Q3MJ13 1102 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 CEP135Q66GS9 1140 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 FAM171BQ6P995 826 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 DENND5BQ6ZUT9 1274 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 ARL14EPQ8N8R7 260 aaPredicted RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 SH3RF2Q8TEC5 729 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 SPATA17Q96L03 361 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 CYP2S1Q96SQ9 504 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
RPL28-206ENST00000558752 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 RXFP3Q9NSD7 469 aa16.24■□□□□ 0.19
RPL28-206ENST00000558752 LRRIQ3A6PVS8 624 aaPredicted RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms