RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 DUSP16Q9BY84 665 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 RNF38Q9H0F5 515 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 VPS16Q9H269 839 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 TRPV4Q9HBA0 871 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 MYH10P35580 1976 aa14.64□□□□□ -0.07
TSPAN3-205ENST00000558745 DENND4CQ5VZ89 1909 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 SYCE3A1L190 88 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 ZNF840PA6NDX5 716 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 PES1O00541 588 aaKnown RBP14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 DPYSL4O14531 572 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 NPR3P17342 541 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 PSMC3P17980 439 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 ARHGAP44Q17R89 818 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 EXOC3L4Q17RC7 722 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 GOLGA7BQ2TAP0 167 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 KLHL40Q2TBA0 621 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 CDKAL1Q5VV42 579 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 ARHGAP17Q68EM7 881 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 TTC30AQ86WT1 665 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 TTC39CQ8N584 583 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 RBBP8NLQ8NC74 664 aaPredicted RBP14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 TRMT61BQ9BVS5 477 aaKnown RBP14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 HSD3B7Q9H2F3 369 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 SIX2Q9NPC8 291 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 SLC2A4RGQ9NR83 387 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 IL37Q9NZH6 218 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 GMIPQ9P107 970 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 TSPAN16Q9UKR8 245 aa14.63□□□□□ -0.07
TSPAN3-205ENST00000558745 OBSL1O75147 1896 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 ZNF638Q14966 1978 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 PI15O43692 258 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 RTN3O95197 1032 aaPredicted RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 KRT5P13647 590 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 HDCP19113 662 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 TRIM21P19474 475 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 CD72P21854 359 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 BRD2P25440 801 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 AVPR1AP37288 418 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 KLK7P49862 253 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 YWHAEP62258 255 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 ZXDBP98169 803 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 GCNT1Q02742 428 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 KRT31Q15323 416 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 SLC44A4Q53GD3 710 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 SGO2Q562F6 1265 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 AOPEPQ8N6M6 819 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 FLCNQ8NFG4 579 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 NDRG1Q92597 394 aaKnown RBP14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 CEP295NLQ96MC4 621 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 FUCA2Q9BTY2 467 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 BRD9Q9H8M2 597 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 HEBP1Q9NRV9 189 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 WNT16Q9UBV4 365 aa14.62□□□□□ -0.07
TSPAN3-205ENST00000558745 ANAPC1Q9H1A4 1944 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 USP34Q70CQ2 3546 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 BECN2A8MW95 431 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 STK25O00506 426 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 PNMA6AP0CW24 399 aaPredicted RBP14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 VDRP11473 427 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 DDX6P26196 483 aaKnown RBP eCLIP14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 EEF1GP26641 437 aaKnown RBP14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 USP8P40818 1118 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 VCPP55072 806 aaKnown RBP14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 MYL5Q02045 173 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 PDE4CQ08493 712 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 PIGZQ86VD9 579 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 YAF2Q8IY57 180 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 CELF5Q8N6W0 485 aaKnown RBP14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 ANKRD52Q8NB46 1076 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 BPIFB1Q8TDL5 484 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 SLITRK1Q96PX8 696 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 NMUR1Q9HB89 426 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 TDP1Q9NUW8 608 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 OSER1Q9NX31 292 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 DNAJC12Q9UKB3 198 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 NUDT5Q9UKK9 219 aa14.61□□□□□ -0.07
TSPAN3-205ENST00000558745 TRAV19A0A0A6YYK7 116 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 O00370 1275 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 PIK3R2O00459 728 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 SCAMP3O14828 347 aaKnown RBP14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 ZNF263O14978 683 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 CYP26A1O43174 497 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 TBX18O95935 607 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 CKMP06732 381 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 ATP1A3P13637 1013 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 WEE1P30291 646 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 KIF11P52732 1056 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 ZNF132P52740 706 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 MFAP3P55082 362 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 TNK2Q07912 1038 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 TRIM68Q6AZZ1 485 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 BMP8AQ7Z5Y6 402 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 DHX40Q8IX18 779 aaKnown RBP14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 LSM14BQ9BX40 385 aaKnown RBP14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 DNAI2Q9GZS0 605 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 MFSD1Q9H3U5 465 aa14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 FAM124BQ9H5Z6 455 aaPredicted RBP14.6□□□□□ -0.07
TSPAN3-205ENST00000558745 CCSER2Q9H7U1 834 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms