RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 C9orf72Q96LT7 481 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLITRK1Q96PX8 696 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SELENOSQ9BQE4 189 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 DCLK3Q9C098 648 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 CNTN3Q9P232 1028 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 TBK1Q9UHD2 729 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 FAM187AA6NFU0 413 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 CREB3O43889 395 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCT5P48643 541 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 NDUFV1P49821 464 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 ITGA8P53708 1063 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 BYSLQ13895 437 aaKnown RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 LCLAT1Q6UWP7 414 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCDC91Q7Z6B0 441 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 PIGZQ86VD9 579 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 OSTM1Q86WC4 334 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRRC52Q8N7C0 313 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 EXD1Q8NHP7 514 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 ACTL9Q8TC94 416 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 EBAG9O00559 213 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 MGEA5O60502 916 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 ADAMTS4O75173 837 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 AP1G2O75843 785 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 TFE3P19532 575 aaPredicted RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 CA8P35219 290 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 PNPLA4P41247 253 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 VEGFBP49765 207 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 OTUD4Q01804 1114 aaKnown RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 TAP1Q03518 808 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SMAD1Q15797 465 aaKnown RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 TFDP3Q5H9I0 405 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 IZUMO3Q5VZ72 239 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 DARS2Q6PI48 645 aaKnown RBP11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SERINC5Q86VE9 423 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 ATL2Q8NHH9 583 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 GRK7Q8WTQ7 553 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 SEMA4AQ9H3S1 761 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 NME7Q9Y5B8 376 aa11.33□□□□□ -0.6
CSPG4P5-201ENST00000558731 PMS2P54278 862 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 FAXCQ5TGI0 409 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 EDEM1Q92611 657 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 DEFB118Q96PH6 123 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 KCNK16Q96T55 309 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 MAGEB5Q9BZ81 275 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 LHX5Q9H2C1 402 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 KBTBD13C9JR72 458 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 FSCN2O14926 492 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 PAPSS1O43252 624 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 TKTP29401 623 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 GRK4P32298 578 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 BCAT1P54687 386 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCL23P55773 120 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZNF268Q14587 947 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 CCDC38Q502W7 563 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 BSPRYQ5W0U4 402 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 AGMOQ6ZNB7 445 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 DEFB128Q7Z7B8 93 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 KATNAL2Q8IYT4 538 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 GLIS1Q8NBF1 620 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 ZNF296Q8WUU4 475 aaPredicted RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 NCAPGQ9BPX3 1015 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 SYT15Q9BQS2 421 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC38A7Q9NVC3 462 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 PSD3Q9NYI0 1048 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 NUDT5Q9UKK9 219 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 ATP8B3O60423 1300 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 MYBPHLA2RUH7 354 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 AGPSO00116 658 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 KIAA0754O94854 1291 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 OR4Q2P0C623 313 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 PTPN1P18031 435 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 RDXP35241 583 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 PBX3P40426 434 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 BST2Q10589 180 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 SLC29A2Q14542 456 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 KCNN1Q92952 543 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 PGLYRP2Q96PD5 576 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 SEPT10Q9P0V9 454 aa11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.32□□□□□ -0.6
CSPG4P5-201ENST00000558731 LRRC37A2A6NM11 1700 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 MCF2LO15068 1137 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 SULT1E1P49888 294 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 SNX16P57768 344 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 DUPD1Q68J44 220 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 GLB1LQ6UWU2 654 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 TTC39CQ8N584 583 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 FAM71DQ8N9W8 422 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 C3orf58Q8NDZ4 430 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 KBTBD7Q8WVZ9 684 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 CNPY3Q9BT09 278 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 SENP6Q9GZR1 1112 aaPredicted RBP11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 PTCH2Q9Y6C5 1203 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 GRIN2DO15399 1336 aa11.31□□□□□ -0.6
CSPG4P5-201ENST00000558731 NT5C1B-RDH14C9J2C7 533 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms