RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 RAD9BQ6WBX8 426 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 LHFPL2Q6ZUX7 228 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TBC1D1Q86TI0 1168 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CBWD2Q8IUF1 395 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 SIX5Q8N196 739 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CARNMT1Q8N4J0 409 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 NAT8LQ8N9F0 302 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CCDC150Q8NCX0 1101 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ANKRD20A12PQ8NF67 263 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 OR8H1Q8NGG4 311 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 LMO3Q8TAP4 145 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 BHMTQ93088 406 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ZNF689Q96CS4 500 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 FAM81BQ96LP2 452 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ACAP3Q96P50 834 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 BAG1Q99933 345 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TUBGCP2Q9BSJ2 902 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 RHOBTB2Q9BYZ6 727 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 RPF1Q9H9Y2 349 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TOPORSQ9NS56 1045 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 RBAKQ9NYW8 714 aaPredicted RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ZMAT5Q9UDW3 170 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 PPP2R2CQ9Y2T4 447 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 HRO43593 1189 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TMCC2O75069 709 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 SLU7O95391 586 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 AFPP02771 609 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ITGA4P13612 1032 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 RAG1P15918 1043 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 FGFR4P22455 802 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CASP14P31944 242 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TNFSF9P41273 254 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 FMO5P49326 533 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 SEPHS1P49903 392 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CYP2J2P51589 502 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 MRPS25P82663 173 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 GRIK3Q13003 919 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 IKBKEQ14164 716 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 GALEQ14376 348 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 GFOD2Q3B7J2 385 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ZC3H14Q6PJT7 736 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 AGMOQ6ZNB7 445 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 BTN2A1Q7KYR7 527 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 C16orf59Q7L2K0 433 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 CMTR2Q8IYT2 770 aaKnown RBP4.32□□□□□ -1.72
ZEB1-212ENST00000558655 VPS52Q8N1B4 723 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TEX9Q8N6V9 391 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 LRRC52Q8N7C0 313 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 GSTCDQ8NEC7 633 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ZSWIM2Q8NEG5 633 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 DBF4BQ8NFT6 615 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ZNF516Q92618 1163 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ASIC4Q96FT7 647 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ADAM2Q99965 735 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 FAM213AQ9BRX8 229 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TMEM175Q9BSA9 504 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 YIPF4Q9BSR8 244 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 TMEM117Q9H0C3 514 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 AASDHPPTQ9NRN7 309 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 SLC38A7Q9NVC3 462 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 ITGA11Q9UKX5 1188 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 MYO6Q9UM54 1294 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 DMTF1Q9Y222 760 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 SIK3Q9Y2K2 1263 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 PAXBP1Q9Y5B6 917 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 PCDHA11Q9Y5I1 949 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 RAI2Q9Y5P3 530 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 GREB1Q4ZG55 1949 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 PTPRJQ12913 1337 aa4.32□□□□□ -1.72
ZEB1-212ENST00000558655 A0A1W2PQJ5 194 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 LACTBL1A8MY62 500 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 PTGESO14684 152 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 POLR3GO15318 223 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 ZBTB24O43167 697 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 XPOTO43592 962 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 RECQL4O94761 1208 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 AMHP03971 560 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 RPL9P32969 192 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 AARSP49588 968 aaKnown RBP eCLIP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 YARSP54577 528 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 WNT7BP56706 349 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 WDR5P61964 334 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 PPP3CAQ08209 521 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 MRPL28Q13084 256 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 EIF2B5Q13144 721 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TBX2Q13207 712 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 RSPO4Q2I0M5 234 aaPredicted RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 CCDC40Q4G0X9 1142 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 CLLU1OSQ5K130 101 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TMEM240Q5SV17 173 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 SPECC1LQ69YQ0 1117 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 NUDT18Q6ZVK8 323 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 EFCAB13Q8IY85 973 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 GPR65Q8IYL9 337 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 NKAPQ8N5F7 415 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 CHAC2Q8WUX2 184 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 C17orf50Q8WW18 174 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 NANOS1Q8WY41 292 aaKnown RBP4.31□□□□□ -1.72
ZEB1-212ENST00000558655 TOP1MTQ969P6 601 aa4.31□□□□□ -1.72
ZEB1-212ENST00000558655 SAAL1Q96ER3 474 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms