RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DMAP1Q9NPF5 467 aaPredicted RBP12.66□□□□□ -0.38
HERC1-202ENST00000558324 RMND1Q9NWS8 449 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 NCDNQ9UBB6 729 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 ARHGAP26Q9UNA1 814 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 SMG5Q9UPR3 1016 aaKnown RBP12.66□□□□□ -0.38
HERC1-202ENST00000558324 CPQQ9Y646 472 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 CACNA1IQ9P0X4 2223 aa12.66□□□□□ -0.38
HERC1-202ENST00000558324 CHURC1-FNTBB4DL54 471 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 LEFTY2O00292 366 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 LILRB5O75023 590 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 EGFP01133 1207 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 MBL2P11226 248 aaPredicted RBP12.65□□□□□ -0.38
HERC1-202ENST00000558324 CD58P19256 250 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 ADORA2BP29275 332 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 GJA4P35212 333 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 FNTBP49356 437 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 SLC5A3P53794 718 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 ZXDBP98169 803 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 GRSF1Q12849 480 aaKnown RBP eCLIP12.65□□□□□ -0.38
HERC1-202ENST00000558324 EML3Q32P44 896 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 TMEM196Q5HYL7 178 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 PKN3Q6P5Z2 889 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 PAQR9Q6ZVX9 377 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 C12orf29Q8N999 325 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 SCAMP5Q8TAC9 235 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 RUBCNQ92622 972 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 NELL1Q92832 810 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 ATP2A3Q93084 1043 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 TWNKQ96RR1 684 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
HERC1-202ENST00000558324 NIF3L1Q9GZT8 377 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 RNF38Q9H0F5 515 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 LINC00597Q9H2U6 94 aa12.65□□□□□ -0.38
HERC1-202ENST00000558324 APOBEC3GQ9HC16 384 aaKnown RBP12.65□□□□□ -0.38
HERC1-202ENST00000558324 FBRSL1Q9HCM7 1045 aaKnown RBP12.65□□□□□ -0.38
HERC1-202ENST00000558324 F5P12259 2224 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 ZNF638Q14966 1978 aaKnown RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 BEST1O76090 585 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 RTN3O95197 1032 aaPredicted RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 SMC2O95347 1197 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 OAS1P00973 400 aaKnown RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 EPB41P11171 864 aaKnown RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 PRCPP42785 496 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 PPP3CCP48454 512 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 NRLP54845 237 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 MAP3K7CLP57077 242 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 AMPD2Q01433 879 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 SRSF5Q13243 272 aaKnown RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 EDRF1Q3B7T1 1238 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 DCAF17Q5H9S7 520 aaPredicted RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 ZNF658Q5TYW1 1059 aaPredicted RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 TCERG1LQ5VWI1 586 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 MAMSTRQ6ZN01 415 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 CCDC150Q8NCX0 1101 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 ENGASEQ8NFI3 743 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 SMARCE1Q969G3 411 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 SMOQ99835 787 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 P2RY13Q9BPV8 354 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 EPC1Q9H2F5 836 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 POLR3BQ9NW08 1133 aaPredicted RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 GMIPQ9P107 970 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 CHORDC1Q9UHD1 332 aaPredicted RBP12.64□□□□□ -0.39
HERC1-202ENST00000558324 GREB1Q4ZG55 1949 aa12.64□□□□□ -0.39
HERC1-202ENST00000558324 FANCMQ8IYD8 2048 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 TRIM49BA6NDI0 452 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 K7ESF4 209 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 TRDMT1O14717 391 aaKnown RBP12.63□□□□□ -0.39
HERC1-202ENST00000558324 CETN3O15182 167 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 RNF40O75150 1001 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 NFATC1O95644 943 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 OLFM2O95897 454 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 PFKLP17858 780 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 TRIM21P19474 475 aaKnown RBP12.63□□□□□ -0.39
HERC1-202ENST00000558324 PXNP49023 591 aaPredicted RBP12.63□□□□□ -0.39
HERC1-202ENST00000558324 MXI1P50539 228 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 GALK1P51570 392 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 SLC7A9P82251 487 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 KRT39Q6A163 491 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 ISM2Q6H9L7 571 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 PRR23BQ6ZRT6 265 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 FILIP1Q7Z7B0 1213 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 CRYBG2Q8N1P7 616 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 PDZD8Q8NEN9 1154 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 SEMA4DQ92854 862 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 CD101Q93033 1021 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 TSG101Q99816 390 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 NT5C1AQ9BXI3 368 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 PCDHA5Q9Y5H7 936 aa12.63□□□□□ -0.39
HERC1-202ENST00000558324 HELZP42694 1942 aaKnown RBP12.62□□□□□ -0.39
HERC1-202ENST00000558324 ANAPC1Q9H1A4 1944 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 CFAP54Q96N23 3096 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 COCHO43405 550 aa12.62□□□□□ -0.39
HERC1-202ENST00000558324 FAM200BP0CF97 657 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms