RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 ADORA2AP29274 412 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 GBP2P32456 591 aaPredicted RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 CHKAP35790 457 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ACADSBP45954 432 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 OGDHQ02218 1023 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 TRIP13Q15645 432 aaPredicted RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 HIF1AQ16665 826 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 LONRF1Q17RB8 773 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SKIDA1Q1XH10 827 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ZNF394Q53GI3 561 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 C9orf131Q5VYM1 1079 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 KAZNQ674X7 775 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ARHGAP17Q68EM7 881 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SLC27A1Q6PCB7 646 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 RGS9BPQ6ZS82 235 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ILDR2Q71H61 639 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SESTD1Q86VW0 696 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 CCDC13Q8IYE1 715 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 PDIK1LQ8N165 341 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ATP11CQ8NB49 1132 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 MDM1Q8TC05 714 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 CCT6BQ92526 530 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 MAML1Q92585 1016 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 ELMO3Q96BJ8 720 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 PARK7Q99497 189 aaKnown RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 FDXACB1Q9BRP7 624 aaPredicted RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 HERPUD2Q9BSE4 406 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 C16orf70Q9BSU1 422 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 DDX23Q9BUQ8 820 aaKnown RBP8.71□□□□□ -1.02
SPG11-209ENST00000558253 ELOVL4Q9GZR5 314 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 MINDY3Q9H8M7 445 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SAYSD1Q9NPB0 183 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 EURLQ9NYK6 297 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 HESX1Q9UBX0 185 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 AGAP1Q9UPQ3 857 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 NAALADL1Q9UQQ1 740 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 NRCAMQ92823 1304 aa8.71□□□□□ -1.02
SPG11-209ENST00000558253 SMIM35A0A1B0GVV1 85 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 SMIM23A6NLE4 172 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 C2CD4BA6NLJ0 364 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 E7ESA3 106 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PI4K2BG5E9Z4 385 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GOLGA8SH3BPF8 625 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 M0QYV0 167 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PDHXO00330 501 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 TLL1O43897 1013 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PRPSAP2O60256 369 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 DNAJC8O75937 253 aaPredicted RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 ATP5HO75947 161 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 ZWINTO95229 277 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 RPLP2P05387 115 aaKnown RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 KRT10P13645 584 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PECAM1P16284 738 aaPredicted RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 MIPP30301 263 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 STX2P32856 288 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GJA5P36382 358 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GJC1P36383 396 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 SLCO1A2P46721 670 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 NR2C2P49116 596 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GEMIN4P57678 1058 aaKnown RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 OSTNP61366 133 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 XRCC4Q13426 336 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GRB14Q14449 540 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 GRIK4Q16099 956 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 C2CD6Q53TS8 623 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 CYP4A22Q5TCH4 519 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 LLGL2Q6P1M3 1020 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 NOTUMQ6P988 496 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 BZW1Q7L1Q6 419 aaKnown RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 DPP9Q86TI2 863 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 TMEM110Q86TL2 294 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 NME8Q8N427 588 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PYROXD1Q8WU10 500 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 TRAPPC12Q8WVT3 735 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PRCCQ92733 491 aaPredicted RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 LRRC39Q96DD0 335 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 RTP4Q96DX8 246 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 SMC6Q96SB8 1091 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 CPXM1Q96SM3 734 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 SPSB2Q99619 263 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PRMT1Q99873 361 aaKnown RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 KATNBL1Q9H079 304 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 KCNK9Q9NPC2 374 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PDGFCQ9NRA1 345 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 HAUS2Q9NVX0 235 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 PAK5Q9P286 719 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 ZMYND8Q9ULU4 1186 aaPredicted RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 POLIQ9UNA4 740 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 ARL2BPQ9Y2Y0 163 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 Q9Y3F1 56 aa8.7□□□□□ -1.02
SPG11-209ENST00000558253 USP15Q9Y4E8 981 aaPredicted RBP8.7□□□□□ -1.02
SPG11-209ENST00000558253 DOCK5Q9H7D0 1870 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 GLTPD2A6NH11 291 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 RASA4BC9J798 803 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 TRDMT1O14717 391 aaKnown RBP8.69□□□□□ -1.02
SPG11-209ENST00000558253 MDM4O15151 490 aa8.69□□□□□ -1.02
SPG11-209ENST00000558253 CHADO15335 359 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms