RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 DHCR24Q15392 516 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ZRSR1Q15695 479 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 ME3Q16798 604 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 PLEKHG6Q3KR16 790 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SV2CQ496J9 727 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ZC2HC1CQ53FD0 456 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 WDR45BQ5MNZ6 344 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 EMC10Q5UCC4 262 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SLFN12LQ6IEE8 588 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 DTHD1Q6ZMT9 781 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TOGARAM2Q6ZUX3 1019 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 GLRX5Q86SX6 157 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 NT5DC4Q86YG4 428 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SPATA2LQ8IUW3 424 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 SCN4BQ8IWT1 228 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TMEM86AQ8N2M4 240 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 C4orf32Q8N8J7 132 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 PNPLA1Q8N8W4 532 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 IGSF22Q8N9C0 903 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SYT2Q8N9I0 419 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 TRIML1Q8N9V2 468 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SPRYD3Q8NCJ5 442 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 MDM1Q8TC05 714 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ADAM32Q8TC27 787 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 SETD7Q8WTS6 366 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 LEO1Q8WVC0 666 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 FOXJ1Q92949 421 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 KCNN1Q92952 543 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 GTF3C6Q969F1 213 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ZNF419Q96HQ0 510 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 C8orf76Q96K31 380 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ZNF560Q96MR9 790 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 CAMK1GQ96NX5 476 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 BBC3Q96PG8 261 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 SLC22A12Q96S37 553 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 UBL7Q96S82 380 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 MSTO1Q9BUK6 570 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ZDHHC5Q9C0B5 715 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 FSCN3Q9NQT6 498 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 ARHGEF4Q9NR80 690 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TMLHEQ9NVH6 421 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 DDX43Q9NXZ2 648 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 EHD2Q9NZN4 543 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 TRPM5Q9NZQ8 1165 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 MAGEC2Q9UBF1 373 aaPredicted RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 DKK4Q9UBT3 224 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 CPSF3Q9UKF6 684 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 KNTC1P50748 2209 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 GOLGA4Q13439 2230 aaKnown RBP5.56□□□□□ -1.52
SPG11-208ENST00000558155 ANAPC1Q9H1A4 1944 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 PLXND1Q9Y4D7 1925 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 OBSL1O75147 1896 aa5.56□□□□□ -1.52
SPG11-208ENST00000558155 C2orf78A6NCI8 922 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ANTXRLA6NF34 631 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 TRABD2BA6NFA1 517 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 LAD1O00515 517 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 FAM189A1O60320 539 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ADAM23O75077 832 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 TADA3O75528 432 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 PIGRP01833 764 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CYP17A1P05093 508 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 PLA2G4BP0C869 781 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 MAGEA11P43364 429 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 KIR2DL1P43626 348 aaPredicted RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 LHX1P48742 406 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ACOT2P49753 483 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 SLC7A9P82251 487 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 GUCY1B3Q02153 619 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 GAD2Q05329 585 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CYP4F3Q08477 520 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 SUZ12Q15022 739 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 GAB4Q2WGN9 574 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CFAP221Q4G0U5 840 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 INTS6LQ5JSJ4 861 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 BTBD8Q5XKL5 378 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ADALQ6DHV7 355 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 RHBDF2Q6PJF5 856 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 C4orf50Q6ZRC1 276 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 TMPRSS7Q7RTY8 843 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 FILIP1Q7Z7B0 1213 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 ZNF605Q86T29 641 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 SLCO6A1Q86UG4 719 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 DDX42Q86XP3 938 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPG11-208ENST00000558155 NAXDQ8IW45 347 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 SCUBE3Q8IX30 993 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 GALNT15Q8N3T1 639 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 MYCT1Q8N699 235 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 LSM14AQ8ND56 463 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 OR2I1PQ8NGU4 316 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CACTINQ8WUQ7 758 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 FUBP3Q96I24 572 aaKnown RBP eCLIP5.55□□□□□ -1.52
SPG11-208ENST00000558155 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 SPATA17Q96L03 361 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CEP295NLQ96MC4 621 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 CDC6Q99741 560 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.55□□□□□ -1.52
SPG11-208ENST00000558155 CACNA2D2Q9NY47 1150 aa5.55□□□□□ -1.52
SPG11-208ENST00000558155 TBC1D14Q9P2M4 693 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms