RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TIFAQ96CG3 184 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 DAZAP1Q96EP5 407 aaKnown RBP4.11□□□□□ -1.75
SPG11-206ENST00000558093 CCDC136Q96JN2 1154 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 C17orf80Q9BSJ5 609 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 APOL5Q9BWW9 433 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 FSD1LQ9BXM9 530 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 USP22Q9UPT9 525 aa4.11□□□□□ -1.75
SPG11-206ENST00000558093 LINC01548A6NM66 108 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 AP4M1O00189 453 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 CES2O00748 559 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 RRP9O43818 475 aaKnown RBP4.1□□□□□ -1.75
SPG11-206ENST00000558093 INMTO95050 263 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 TPH1P17752 444 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 CTGFP29279 349 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 EPHA3P29320 983 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 CYP4F2P78329 520 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 E2F1Q01094 437 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 STK3Q13188 491 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 GRM1Q13255 1194 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 SEMA5AQ13591 1074 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 LY6KQ17RY6 165 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 PTCHD3Q3KNS1 767 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 TBC1D25Q3MII6 688 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 L1TD1Q5T7N2 865 aaKnown RBP4.1□□□□□ -1.75
SPG11-206ENST00000558093 SIRT6Q8N6T7 355 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 VOPP1Q96AW1 172 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 BTBD1Q9H0C5 482 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 NUP62CLQ9H1M0 184 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 PNPLA8Q9NP80 782 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 COL20A1Q9P218 1284 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 CHPF2Q9P2E5 772 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 ZNF212Q9UDV6 495 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 SERGEFQ9UGK8 458 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 MID2Q9UJV3 735 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 CORO2BQ9UQ03 480 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 FRMD4BQ9Y2L6 1034 aa4.1□□□□□ -1.75
SPG11-206ENST00000558093 AQP7P3A6NL99 342 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 RHPN2P1A8MT19 583 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 CD3EAPO15446 510 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 EXOC3O60645 756 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 PQBP1O60828 265 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 PDE8BO95263 885 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 PARNO95453 639 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 PRKCGP05129 697 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 TXNP10599 105 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 RPL17P18621 184 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 CPT1AP50416 773 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 BCAT1P54687 386 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 SRSF4Q08170 494 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 PRAMEF17Q5VTA0 474 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 SERPINA13PQ6UXR4 307 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 TRIM72Q6ZMU5 477 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 UNC13DQ70J99 1090 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 KCTD20Q7Z5Y7 419 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 SESTD1Q86VW0 696 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 RAB11FIP4Q86YS3 637 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 CYP2W1Q8TAV3 490 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 INO80BQ9C086 356 aaPredicted RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 CIPCQ9C0C6 399 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 XPNPEP3Q9NQH7 507 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 TFCP2L1Q9NZI6 479 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 DNMT3BQ9UBC3 853 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 FAM50BQ9Y247 325 aa4.09□□□□□ -1.75
SPG11-206ENST00000558093 DRG1Q9Y295 367 aaKnown RBP4.09□□□□□ -1.75
SPG11-206ENST00000558093 ZNF213O14771 459 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 HGFP14210 728 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 PGDP52209 483 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 GALEQ14376 348 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 CYP1B1Q16678 543 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 CERKLQ49MI3 558 aaPredicted RBP4.08□□□□□ -1.76
SPG11-206ENST00000558093 ZKSCAN2Q63HK3 967 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 DENND2CQ68D51 928 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 MTHFD1LQ6UB35 978 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 KIRREL2Q6UWL6 708 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 PNLDC1Q8NA58 520 aaKnown RBP4.08□□□□□ -1.76
SPG11-206ENST00000558093 DDB2Q92466 427 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 PCSK5Q92824 1860 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 REPS1Q96D71 796 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 ZNF668Q96K58 619 aaPredicted RBP4.08□□□□□ -1.76
SPG11-206ENST00000558093 PRR25Q96S07 402 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 MACROD1Q9BQ69 325 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 VN1R3Q9BXE9 311 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 ZCWPW1Q9H0M4 648 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 CHST8Q9H2A9 424 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 DHX36Q9H2U1 1008 aaKnown RBP4.08□□□□□ -1.76
SPG11-206ENST00000558093 SNX15Q9NRS6 342 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 TBC1D23Q9NUY8 699 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 AMFRQ9UKV5 643 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 GABRQQ9UN88 632 aa4.08□□□□□ -1.76
SPG11-206ENST00000558093 AOX1Q06278 1338 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 UBE2Q2LH0YL09 131 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 FOXN3O00409 490 aaPredicted RBP4.07□□□□□ -1.76
SPG11-206ENST00000558093 SNX2O60749 519 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 TJP3O95049 919 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 CDK4P11802 303 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 IL1R1P14778 569 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 FPR3P25089 353 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 IL1R2P27930 398 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 UQCRC1P31930 480 aa4.07□□□□□ -1.76
SPG11-206ENST00000558093 GKP32189 559 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms