RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 PPP1R26Q5T8A7 1209 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-202ENST00000558077 RBM43Q6ZSC3 357 aaKnown RBP14.38□□□□□ -0.11
ALPK3-202ENST00000558077 TPRG1Q6ZUI0 275 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 GPRIN1Q7Z2K8 1008 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 CCDC150Q8NCX0 1101 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 PJA1Q8NG27 643 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 KAT5Q92993 513 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 CHFRQ96EP1 664 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 SHDQ96IW2 340 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 OSBPL6Q9BZF3 934 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 NUP62CLQ9H1M0 184 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 FAM124BQ9H5Z6 455 aaPredicted RBP14.38□□□□□ -0.11
ALPK3-202ENST00000558077 HPS4Q9NQG7 708 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 SIT1Q9Y3P8 196 aa14.38□□□□□ -0.11
ALPK3-202ENST00000558077 MYOFQ9NZM1 2061 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 TRAV19A0A0A6YYK7 116 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 OTOL1A6NHN0 477 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-202ENST00000558077 DPYSL4O14531 572 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 P4HA2O15460 535 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 GNA14O95837 355 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 OAS1P00973 400 aaKnown RBP14.37□□□□□ -0.11
ALPK3-202ENST00000558077 HDCP19113 662 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 YWHAQP27348 245 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 AVPR1AP37288 418 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 SLC5A3P53794 718 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 MAP3K7CLP57077 242 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 TNK2Q07912 1038 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 LRMPQ12912 555 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 USP4Q13107 963 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 ZNF77Q15935 545 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 SNX30Q5VWJ9 437 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 ARHGAP17Q68EM7 881 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 DTWD2Q8NBA8 298 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 EHBP1Q8NDI1 1231 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 CLDN23Q96B33 292 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 TMEM176AQ96HP8 235 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 KIF9Q9HAQ2 790 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 TRPC7Q9HCX4 862 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 COMMD8Q9NX08 183 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 GTSE1Q9NYZ3 720 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 TRPM5Q9NZQ8 1165 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 CHORDC1Q9UHD1 332 aaPredicted RBP14.37□□□□□ -0.11
ALPK3-202ENST00000558077 ARHGAP26Q9UNA1 814 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 ATP8B3O60423 1300 aa14.37□□□□□ -0.11
ALPK3-202ENST00000558077 MYO16Q9Y6X6 1858 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 FAM170BA6NMN3 283 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 RNF225M0QZC1 329 aaPredicted RBP14.36□□□□□ -0.11
ALPK3-202ENST00000558077 STK25O00506 426 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 RTN3O95197 1032 aaPredicted RBP14.36□□□□□ -0.11
ALPK3-202ENST00000558077 USP17L7P0C7H9 530 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 PFKLP17858 780 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 SOX9P48436 509 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 PPP3CCP48454 512 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 SLC7A9P82251 487 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 TXNDC11Q6PKC3 985 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 ARHGEF19Q8IW93 802 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 YAF2Q8IY57 180 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 TTC39CQ8N584 583 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 OVCA2Q8WZ82 227 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 PRRX2Q99811 253 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 ZSWIM1Q9BR11 485 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 DUSP16Q9BY84 665 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 EHD2Q9NZN4 543 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 PIAS3Q9Y6X2 628 aa14.36□□□□□ -0.11
ALPK3-202ENST00000558077 H0Y858 1186 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 AFPP02771 609 aaKnown RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 FAM200BP0CF97 657 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 ARSAP15289 507 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 IFRD2Q12894 506 aaPredicted RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 TTC30AQ86WT1 665 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 MAML2Q8IZL2 1156 aaPredicted RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 TTC8Q8TAM2 541 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 FBXO32Q969P5 355 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 ZFRQ96KR1 1074 aaKnown RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 CNOT6LQ96LI5 555 aaKnown RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 KREMEN1Q96MU8 473 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 GBP4Q96PP9 640 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 SLITRK1Q96PX8 696 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 NELL2Q99435 816 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 PHOX2BQ99453 314 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 GMIPQ9P107 970 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.35□□□□□ -0.11
ALPK3-202ENST00000558077 USP3Q9Y6I4 520 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 FANCMQ8IYD8 2048 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 ATG2BQ96BY7 2078 aa14.35□□□□□ -0.11
ALPK3-202ENST00000558077 SPECC1L-ADORA2AF8WAN1 911 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 MAN2B1O00754 1011 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 CKMP06732 381 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 CCDC192P0DO97 292 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 ERCC5P28715 1186 aaPredicted RBP14.34□□□□□ -0.11
ALPK3-202ENST00000558077 CTHP32929 405 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 KIF11P52732 1056 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 PTPN5P54829 565 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 PLCB2Q00722 1185 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 MTF1Q14872 753 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 UBXN2BQ14CS0 331 aa14.34□□□□□ -0.11
ALPK3-202ENST00000558077 PKDCCQ504Y2 493 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms