RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 BCL7CQ8WUZ0 217 aaPredicted RBP21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 HERPUD2Q9BSE4 406 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 DDX47Q9H0S4 455 aaKnown RBP21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 KIAA0355O15063 1070 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 IL1R2P27930 398 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 RFC2P35250 354 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 SNX16P57768 344 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 TSPY1Q01534 308 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 KCNT1Q5JUK3 1230 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 CCDC50Q8IVM0 306 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 SMARCD1Q96GM5 515 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ZWILCHQ9H900 591 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 PCSK1NQ9UHG2 260 aa21.43■■□□□ 1.02
SNRPA1-205ENST00000558036 ARHGEF37A1IGU5 675 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 DGKIO75912 1065 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 ACADSBP45954 432 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 TUBB4BP68371 445 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 VARS2Q5ST30 1063 aaKnown RBP21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 MICAL3Q7RTP6 2002 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 RNF25Q96BH1 459 aaPredicted RBP21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 COLEC11Q9BWP8 271 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 LRRC4Q9HBW1 653 aa21.42■■□□□ 1.02
SNRPA1-205ENST00000558036 TFE3P19532 575 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 TKTL1P51854 596 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 ADCY1Q08828 1119 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 CCDC14Q49A88 953 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 MFSD5Q6N075 450 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 C8orf74Q6P047 294 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 SLC13A5Q86YT5 568 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 ZDHHC17Q8IUH5 632 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 KATNAL2Q8IYT4 538 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 HEMGNQ9BXL5 484 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 DMGDHQ9UI17 866 aaKnown RBP21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 LCMT1Q9UIC8 334 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 OAZ2O95190 189 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 SLC25A11Q02978 314 aaKnown RBP21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 SLC39A12Q504Y0 691 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 FAM43BQ6ZT52 329 aaPredicted RBP21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 TAS1R1Q7RTX1 841 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 SIX6OS1Q8N1H7 587 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 UBE2Q2Q8WVN8 375 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 CNPY3Q9BT09 278 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 CYLDQ9NQC7 956 aa21.41■■□□□ 1.02
SNRPA1-205ENST00000558036 ZRANB2O95218 330 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 RALAP11233 206 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 MIPP30301 263 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 VSNL1P62760 191 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 SMC1AQ14683 1233 aaKnown RBP21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 FUT10Q6P4F1 479 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 SLC26A9Q7LBE3 791 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 OTOP2Q7RTS6 562 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 KCTD13Q8WZ19 329 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 RAPGEF5Q92565 580 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 TOP1MTQ969P6 601 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 FAM149B1Q96BN6 582 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 NAP1L3Q99457 506 aaPredicted RBP21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 ADAM33Q9BZ11 813 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 SF3B1O75533 1304 aaKnown RBP eCLIP21.4■■□□□ 1.026e-7■■■■■ 56
SNRPA1-205ENST00000558036 ABHD14A-ACY1A0A1B0GW23 586 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 HHLA1C9JL84 531 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 KRT1P04264 644 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 ULBP1Q9BZM6 244 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 NGRNQ9NPE2 291 aaKnown RBP21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 ASNSD1Q9NWL6 643 aa21.4■■□□□ 1.02
SNRPA1-205ENST00000558036 SYN3O14994 580 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 SART1O43290 800 aaKnown RBP21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 RNF8O76064 485 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 H2AFXP16104 143 aaPredicted RBP21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 CYP2F1P24903 491 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 SDC4P31431 198 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 WDR5P61964 334 aaKnown RBP21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 RTP2Q5QGT7 225 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 LRRC38Q5VT99 294 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 SPATA2LQ8IUW3 424 aaPredicted RBP21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 TMEM199Q8N511 208 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 PEBP4Q96S96 227 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 TMEM175Q9BSA9 504 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 CSNK1G1Q9HCP0 422 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 AMACRQ9UHK6 382 aa21.39■■□□□ 1.01
SNRPA1-205ENST00000558036 ZSCAN5CA6NGD5 496 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 RAD51CO43502 376 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 ALDH7A1P49419 539 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 MRPS5P82675 430 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 CTXN3Q4LDR2 81 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 HFE2Q6ZVN8 426 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 PRELID2Q8N945 189 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 EXD1Q8NHP7 514 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 FAM172AQ8WUF8 416 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 PGLYRP2Q96PD5 576 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 PLVAPQ9BX97 442 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 CWH43Q9H720 699 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 ABI2Q9NYB9 513 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 USP18Q9UMW8 372 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 FNDC1Q4ZHG4 1894 aaPredicted RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 USP17L7P0C7H9 530 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 RARAP10276 462 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 KRT10P13645 584 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 ATXN1P54253 815 aaKnown RBP21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 ARPP19P56211 112 aa21.38■■□□□ 1.01
SNRPA1-205ENST00000558036 MAPRE1Q15691 268 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms