RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 LCLAT1Q6UWP7 414 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 MRPS31Q92665 395 aaKnown RBP15.15■□□□□ 0.02
USP3-205ENST00000557884 FBXO32Q969P5 355 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 STK33Q9BYT3 514 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 TRPC7Q9HCX4 862 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 EHD2Q9NZN4 543 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 MUTYHQ9UIF7 546 aa15.15■□□□□ 0.02
USP3-205ENST00000557884 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
USP3-205ENST00000557884 ZFP37Q9Y6Q3 630 aaPredicted RBP15.15■□□□□ 0.02
USP3-205ENST00000557884 F8VZ95 297 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 ABL1P00519 1130 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 CLCN1P35523 988 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 RGS7P49802 495 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 UBASH3AP57075 661 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 BST2Q10589 180 aaKnown RBP15.14■□□□□ 0.01
USP3-205ENST00000557884 HTR4Q13639 388 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 CNGA2Q16280 664 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 DENND1BQ6P3S1 775 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 PIGZQ86VD9 579 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 FAM71AQ8IYT1 594 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 MAB21L3Q8N8X9 362 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 ZSCAN18Q8TBC5 510 aaPredicted RBP15.14■□□□□ 0.01
USP3-205ENST00000557884 FGF14Q92915 247 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 SECISBP2LQ93073 1101 aaKnown RBP15.14■□□□□ 0.01
USP3-205ENST00000557884 SLITRK1Q96PX8 696 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 KXD1Q9BQD3 176 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 TASP1Q9H6P5 420 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 KCNK12Q9HB15 430 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 TRPM5Q9NZQ8 1165 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 IFNKQ9P0W0 207 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 GMIPQ9P107 970 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 NUMBLQ9Y6R0 609 aa15.14■□□□□ 0.01
USP3-205ENST00000557884 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
USP3-205ENST00000557884 MED7O43513 233 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 GFPT2O94808 682 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 CFHP08603 1231 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 SETSIPP0DME0 302 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 KIF11P52732 1056 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 NR1I3Q14994 352 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 STILQ15468 1287 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 TANGO2Q6ICL3 276 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 DENND4AQ7Z401 1863 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 ZNF606Q8WXB4 792 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 SMARCD2Q92925 531 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 KHSRPQ92945 711 aaKnown RBP eCLIP15.13■□□□□ 0.011e-6■■□□□ 14.1
USP3-205ENST00000557884 DOCK6Q96HP0 2047 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 ASB16Q96NS5 453 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 SPAG5Q96R06 1193 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 RPP25Q9BUL9 199 aaKnown RBP15.13■□□□□ 0.01
USP3-205ENST00000557884 SLC46A2Q9BY10 475 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 SMG9Q9H0W8 520 aaKnown RBP15.13■□□□□ 0.01
USP3-205ENST00000557884 SMOC2Q9H3U7 446 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 IL37Q9NZH6 218 aa15.13■□□□□ 0.01
USP3-205ENST00000557884 CHORDC1Q9UHD1 332 aaPredicted RBP15.13■□□□□ 0.01
USP3-205ENST00000557884 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 C2orf78A6NCI8 922 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 ZNF840PA6NDX5 716 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 ANHXE9PGG2 379 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PIK3R2O00459 728 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 FCARP24071 287 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 VIPR2P41587 438 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PGFP49763 221 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 JAM2P57087 298 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PTK2Q05397 1052 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PKDCCQ504Y2 493 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 TAF3Q5VWG9 929 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 MTSS1LQ765P7 747 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 MON1AQ86VX9 555 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PASD1Q8IV76 773 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 ARID3BQ8IVW6 561 aaPredicted RBP15.12■□□□□ 0.01
USP3-205ENST00000557884 SLC22A12Q96S37 553 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 FBXO44Q9H4M3 255 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 PNPLA8Q9NP80 782 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 COMMD8Q9NX08 183 aa15.12■□□□□ 0.01
USP3-205ENST00000557884 TRIOO75962 3097 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 FAM170AA1A519 330 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 PRAMEF12O95522 483 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 USP17L7P0C7H9 530 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 LCP1P13796 627 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 DDX6P26196 483 aaKnown RBP eCLIP15.11■□□□□ 0.01
USP3-205ENST00000557884 SOX5P35711 763 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 PLA2G4AP47712 749 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 TKTL1P51854 596 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 ADIGQ0VDE8 80 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 PMF1Q6P1K2 205 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 CACNA2D4Q7Z3S7 1137 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 CMTM8Q8IZV2 173 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 TTC16Q8NEE8 873 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 NDRG1Q92597 394 aaKnown RBP15.11■□□□□ 0.01
USP3-205ENST00000557884 RSPRY1Q96DX4 576 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 CYP2S1Q96SQ9 504 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 PLA2G2FQ9BZM2 168 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 ULBP1Q9BZM6 244 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 UBXN6Q9BZV1 441 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 LRRC4Q9HBW1 653 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 ZFP14Q9HCL3 533 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 IGSF9Q9P2J2 1179 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 SCML2Q9UQR0 700 aa15.11■□□□□ 0.01
USP3-205ENST00000557884 CUL9Q8IWT3 2517 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms