RNA–Protein interactions for RNA: ENST00000557727.1

CHD8-214, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

Gene CHD8, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-214ENST00000557727 TNIP3Q96KP6 325 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 HNRNPABQ99729 332 aaKnown RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 SMOQ99835 787 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 FAM207AQ9NSI2 230 aaPredicted RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 FAM49BQ9NUQ9 324 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 DNMT3BQ9UBC3 853 aaKnown RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 USP15Q9Y4E8 981 aaPredicted RBP9.57□□□□□ -0.88
CHD8-214ENST00000557727 A0A0C4DFX4 3053 aa9.57□□□□□ -0.88
CHD8-214ENST00000557727 F8VZ95 297 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 GOLGA6L19H0YKK7 550 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 TULP2O00295 520 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 PES1O00541 588 aaKnown RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 PRRG1O14668 218 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 TADA3O75528 432 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 CLSTN1O94985 981 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 PAEPP09466 180 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 RFX1P22670 979 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 MFAP3P55082 362 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 NTHL1P78549 312 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 CYP27A1Q02318 531 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 ITIH3Q06033 890 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 MTMR3Q13615 1198 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 DRAP1Q14919 205 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 SKIV2LQ15477 1246 aaKnown RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 SMAD2Q15796 467 aaKnown RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 DDR2Q16832 855 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 ARHGAP44Q17R89 818 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 PRSS36Q5K4E3 855 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 PPM1LQ5SGD2 360 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 FKBP15Q5T1M5 1219 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 LIN9Q5TKA1 542 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 E4F1Q66K89 784 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 SARM1Q6SZW1 724 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 VSTM1Q6UX27 236 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 CYP26C1Q6V0L0 522 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 C4orf50Q6ZRC1 276 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 CLEC20AQ6ZU45 233 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 SPATA2LQ8IUW3 424 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 ANKRD20A12PQ8NF67 263 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 GPR152Q8TDT2 470 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 CYFIP2Q96F07 1278 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 C8orf48Q96LL4 319 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 KCNK16Q96T55 309 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 SEPT5Q99719 369 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 STK33Q9BYT3 514 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 XPO4Q9C0E2 1151 aaKnown RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 POMKQ9H5K3 350 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 ZNF334Q9HCZ1 680 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 AVENQ9NQS1 362 aaPredicted RBP9.56□□□□□ -0.88
CHD8-214ENST00000557727 KRT82Q9NSB4 513 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 IL37Q9NZH6 218 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 IFNKQ9P0W0 207 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 THEGQ9P2T0 379 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 PCDHGC3Q9UN70 934 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.56□□□□□ -0.88
CHD8-214ENST00000557727 PCDHB4Q9Y5E5 795 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 TRIOO75962 3097 aa9.56□□□□□ -0.88
CHD8-214ENST00000557727 FAM92AA1XBS5 289 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 F8VP50 259 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 SERPINC1P01008 464 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 SRGAP2BP0DMP2 458 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 VDRP11473 427 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 BMP1P13497 986 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 IL9P15248 144 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 BRD2P25440 801 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 TUFMP49411 452 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 UBASH3AP57075 661 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 POLR2FP61218 127 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 YWHAEP62258 255 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 CBX2Q14781 532 aaPredicted RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 MGAT5BQ3V5L5 792 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 LCLAT1Q6UWP7 414 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 EP400NLQ6ZTU2 488 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 GAREM2Q75VX8 874 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 GPRIN1Q7Z2K8 1008 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 DNAJB7Q7Z6W7 309 aaPredicted RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 SLC47A2Q86VL8 602 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 DDX1Q92499 740 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 SMG7Q92540 1137 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 PSMG2Q969U7 264 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 SMARCD1Q96GM5 515 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 SPATA17Q96L03 361 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 FAM81BQ96LP2 452 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 MYRFLQ96LU7 910 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 HEXIM2Q96MH2 286 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 TTLL2Q9BWV7 592 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 WDR6Q9NNW5 1121 aaKnown RBP9.55□□□□□ -0.88
CHD8-214ENST00000557727 DPP7Q9UHL4 492 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 KIAA1257Q9ULG3 409 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 DAAM1Q9Y4D1 1078 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 COL4A2P08572 1712 aa9.55□□□□□ -0.88
CHD8-214ENST00000557727 SLC38A8A6NNN8 435 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 CYP26A1O43174 497 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 AP1G2O75843 785 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 TPM2P07951 284 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 RHOP08100 348 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 CCNYL3P0C7X3 344 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 NPR3P17342 541 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ADORA2BP29275 332 aa9.54□□□□□ -0.88
CHD8-214ENST00000557727 ELF1P32519 619 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms