RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 SLC2A14Q8TDB8 520 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 DEPDC1BQ8WUY9 529 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SEMA4DQ92854 862 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PBXIP1Q96AQ6 731 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ELSPBP1Q96BH3 223 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ELMO3Q96BJ8 720 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 TCEAL4Q96EI5 215 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 CYFIP2Q96F07 1278 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 TRMT2BQ96GJ1 504 aaKnown RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 TMEM176AQ96HP8 235 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SHDQ96IW2 340 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PKMYT1Q99640 499 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 B3GNT5Q9BYG0 378 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 ZNF518BQ9C0D4 1074 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SDCBP2Q9H190 292 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 TASP1Q9H6P5 420 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 BRD9Q9H8M2 597 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 APOBEC3GQ9HC16 384 aaKnown RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 TRPC7Q9HCX4 862 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 FAM49BQ9NUQ9 324 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 COMMD8Q9NX08 183 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 KIAA1257Q9ULG3 409 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 DUSP12Q9UNI6 340 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 PCDHB4Q9Y5E5 795 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 MTCL1Q9Y4B5 1905 aaKnown RBP8.83□□□□□ -1
PSEN1-223ENST00000557511 PRUNE2Q8WUY3 3088 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 SCN1AP35498 2009 aa8.83□□□□□ -1
PSEN1-223ENST00000557511 TRAV19A0A0A6YYK7 116 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 CLDN5O00501 218 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 ZNF263O14978 683 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 CKMP06732 381 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 EEF1GP26641 437 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 YWHAQP27348 245 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 CCR2P41597 374 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 MFAP3P55082 362 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 TPM4P67936 248 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 CYP4F8P98187 520 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 ORC1Q13415 861 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 MAN2A1Q16706 1144 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 SKOR2Q2VWA4 1001 aaPredicted RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 SGO2Q562F6 1265 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 FAM78AQ5JUQ0 283 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 CAVIN1Q6NZI2 390 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 CC2D1AQ6P1N0 951 aaPredicted RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 ENOSF1Q7L5Y1 443 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 ENOX1Q8TC92 643 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 CSGALNACT1Q8TDX6 532 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 RSAD2Q8WXG1 361 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 FGF14Q92915 247 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 IRF7Q92985 503 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 FBXO32Q969P5 355 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 ASB16Q96NS5 453 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 HNRNPABQ99729 332 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 KXD1Q9BQD3 176 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 TRMT61BQ9BVS5 477 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 NACA2Q9H009 215 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 INTS2Q9H0H0 1204 aaKnown RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 FBXO44Q9H4M3 255 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 KIF9Q9HAQ2 790 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 ZNF334Q9HCZ1 680 aaPredicted RBP8.82□□□□□ -1
PSEN1-223ENST00000557511 KRT82Q9NSB4 513 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 GCNT4Q9P109 453 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 WNT16Q9UBV4 365 aa8.82□□□□□ -1
PSEN1-223ENST00000557511 UNC80Q8N2C7 3258 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 FAM86C2PA6NEL3 165 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 SMTNL1A8MU46 457 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 BECN2A8MW95 431 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 KCNJ18B7U540 433 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 F11P03951 625 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 USP17L7P0C7H9 530 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 VDRP11473 427 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 KRT5P13647 590 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 CCDC130P13994 396 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 HMGA1P17096 107 aaKnown RBP8.81□□□□□ -1
PSEN1-223ENST00000557511 PFKLP17858 780 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 PSMC3P17980 439 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 MAP3K7CLP57077 242 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 MYL5Q02045 173 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 GCNT1Q02742 428 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 KCNJ12Q14500 433 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 STILQ15468 1287 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 CCDC142Q17RM4 750 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 FKBP15Q5T1M5 1219 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TANGO2Q6ICL3 276 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TMEM270Q6UE05 265 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 LYPD8Q6UX82 237 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 RBM43Q6ZSC3 357 aaKnown RBP8.81□□□□□ -1
PSEN1-223ENST00000557511 GAREM2Q75VX8 874 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 MON1AQ86VX9 555 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 ARID3BQ8IVW6 561 aaPredicted RBP8.81□□□□□ -1
PSEN1-223ENST00000557511 CMTM8Q8IZV2 173 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 CELF5Q8N6W0 485 aaKnown RBP8.81□□□□□ -1
PSEN1-223ENST00000557511 MAB21L3Q8N8X9 362 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 C12orf29Q8N999 325 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 TTC16Q8NEE8 873 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 FLCNQ8NFG4 579 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 OVCA2Q8WZ82 227 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 EXOC4Q96A65 974 aa8.81□□□□□ -1
PSEN1-223ENST00000557511 JAKMIP2Q96AA8 810 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms