RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 ADH1AP07327 375 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 RPL9P32969 192 aaKnown RBP12.41□□□□□ -0.42
NEK9-210ENST00000557026 STX3Q13277 289 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 KLHDC7AQ5VTJ3 777 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 SPATA18Q8TC71 538 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 PANX3Q96QZ0 392 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 SLC39A8Q9C0K1 460 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 VPS28Q9UK41 221 aa12.41□□□□□ -0.42
NEK9-210ENST00000557026 CNTNAP2Q9UHC6 1331 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 PLA2G6O60733 806 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 APRTP07741 180 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 CHRM3P20309 590 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 YWHAQP27348 245 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 TROAPQ12815 778 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 C6orf203Q9P0P8 240 aaPredicted RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 ENOPH1Q9UHY7 261 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 XPO7Q9UIA9 1087 aaKnown RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 BARX2Q9UMQ3 279 aaPredicted RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 BCL9O00512 1426 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 HACD1B0YJ81 288 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 SUPT3HB4E1H0 165 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 PSMD12O00232 456 aaPredicted RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 SERPIND1P05546 499 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 CYP3A4P08684 503 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 RBP3P10745 1247 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 MLNP12872 115 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 FLOT2Q14254 428 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 ZNF268Q14587 947 aaPredicted RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 AGBL2Q5U5Z8 902 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 ZCCHC8Q6NZY4 707 aaKnown RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 STK40Q8N2I9 435 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 ACO1P21399 889 aaKnown RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 KCNK10P57789 538 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 PURAQ00577 322 aaKnown RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 C1QBPQ07021 282 aaKnown RBP12.4□□□□□ -0.42
NEK9-210ENST00000557026 GIT2Q14161 759 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 GNA13Q14344 377 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 GRM3Q14832 879 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 GRAMD1BQ3KR37 738 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 SPDYAQ5MJ70 313 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 CYP4Z1Q86W10 505 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 FIBCD1Q8N539 461 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 SLC35G2Q8TBE7 412 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 UBE2E3Q969T4 207 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 CLMNQ96JQ2 1002 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 SNX12Q9UMY4 172 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 CDYLQ9Y232 598 aa12.4□□□□□ -0.42
NEK9-210ENST00000557026 A0A0A6YYK5 440 aaPredicted RBP12.4□□□□□ -0.43
NEK9-210ENST00000557026 SLC12A8A0AV02 714 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 C1QTNF3-AMACRE9PGA6 284 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 SRP72O76094 671 aaKnown RBP12.4□□□□□ -0.43
NEK9-210ENST00000557026 CYP2A7P20853 494 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 MAP2K5Q13163 448 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 FAM46CQ5VWP2 391 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 FBXL16Q8N461 479 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 TMEM176AQ96HP8 235 aa12.4□□□□□ -0.43
NEK9-210ENST00000557026 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.43
NEK9-210ENST00000557026 ASCC2Q9H1I8 757 aaPredicted RBP12.4□□□□□ -0.43
NEK9-210ENST00000557026 A0A1W2PQ67 120 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ZMYND10O75800 440 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 STX5Q13190 355 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 PTGISQ16647 500 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 EPB41L4AQ9HCS5 686 aaPredicted RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 FAM49BQ9NUQ9 324 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 GPRC5DQ9NZD1 345 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 DCDC2Q9UHG0 476 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 MTO1Q9Y2Z2 717 aaKnown RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 DTNAQ9Y4J8 743 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 SERPINF2P08697 491 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 CSH1P0DML2 217 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 CSH2P0DML3 217 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 MYBL2P10244 700 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 CHKAP35790 457 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 MAPK9P45984 424 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 NR2C2P49116 596 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ZBTB41Q5SVQ8 909 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 SLC22A9Q8IVM8 553 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 SERPINB12Q96P63 405 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 CCDC3Q9BQI4 270 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 TRABDQ9H4I3 376 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 CYP4F11Q9HBI6 524 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ZDHHC4Q9NPG8 344 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ADA2Q9NZK5 511 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 NOP53Q9NZM5 478 aaKnown RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 MRPS17Q9Y2R5 130 aaKnown RBP12.39□□□□□ -0.43
NEK9-210ENST00000557026 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.433e-9■■■■■ 206.8
NEK9-210ENST00000557026 PREX1Q8TCU6 1659 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ATP1A3P13637 1013 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 PLA2G4AP47712 749 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 PPP3CCP48454 512 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 SESN3P58005 492 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 SLAIN1Q8ND83 568 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 HEXDCQ8WVB3 486 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ATP6V1G3Q96LB4 118 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 ASB2Q96Q27 587 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 NFKBIZQ9BYH8 718 aa12.39□□□□□ -0.43
NEK9-210ENST00000557026 KCTD5Q9NXV2 234 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms