RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DDX50Q9BQ39 737 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 RAB6CQ9H0N0 254 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PORCNQ9H237 461 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PAPOLBQ9NRJ5 636 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 ZNF277Q9NRM2 450 aaPredicted RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 STRIP2Q9ULQ0 834 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 LRCH1Q9Y2L9 728 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 ADGRA2Q96PE1 1338 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 TRIM49D1C9J1S8 452 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 COPEO14579 308 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 NDC80O14777 642 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 KIF3CO14782 793 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 DKC1O60832 514 aaKnown RBP eCLIP11.89□□□□□ -0.51
SRP54-213ENST00000556994 NPTXRO95502 500 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 LSM8O95777 96 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 FESP07332 822 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SKIP12755 728 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PAPOLAP51003 745 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 OSTNP61366 133 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PSMC1P62191 440 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 SLC18A2Q05940 514 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 HADHQ16836 314 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 SGSM1Q2NKQ1 1148 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SH3PXD2AQ5TCZ1 1133 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 FAXCQ5TGI0 409 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SNRNP48Q6IEG0 339 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 OR52E8Q6IFG1 317 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 DARS2Q6PI48 645 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 SLC30A9Q6PML9 568 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PPM1NQ8N819 430 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SLC44A1Q8WWI5 657 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 AKT1S1Q96B36 256 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 SH3GL3Q99963 347 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 KRT82Q9NSB4 513 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 CNTN3Q9P232 1028 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PPARGC1AQ9UBK2 798 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 NXF1Q9UBU9 619 aaKnown RBP11.89□□□□□ -0.51
SRP54-213ENST00000556994 POLIQ9UNA4 740 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 PCNTO95613 3336 aa11.89□□□□□ -0.51
SRP54-213ENST00000556994 CXorf49A8MYA2 514 aaPredicted RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 PIK3R2O00459 728 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 MCF2LO15068 1137 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 UGT1A9O60656 530 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TGDSO95455 350 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 KRT7P08729 469 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 UBTFL6P0CB48 400 aaPredicted RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 RXRBP28702 533 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 CDH8P55286 799 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 INHBEP58166 350 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 SARNPP82979 210 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 TFAMQ00059 246 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 OCRLQ01968 901 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 BMPR2Q13873 1038 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 KRT72Q14CN4 511 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 C11orf91Q3C1V1 193 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 FOXB2Q5VYV0 432 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 POLNQ7Z5Q5 900 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 CHSY1Q86X52 802 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 ARID3BQ8IVW6 561 aaPredicted RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 TTC13Q8NBP0 860 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 RBM15BQ8NDT2 890 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 ZNF668Q96K58 619 aaPredicted RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 CPXM1Q96SM3 734 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TRIM56Q9BRZ2 755 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 VCXQ9H320 206 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 UGT1A7Q9HAW7 530 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 UGT1A10Q9HAW8 530 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 UGT1A8Q9HAW9 530 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 STX18Q9P2W9 335 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 SCOCQ9UIL1 159 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 ASB3Q9Y575 518 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 WNT10BO00744 389 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 AHCYL1O43865 530 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 AP1G2O75843 785 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 SUPT20HL2P0C7V6 817 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 KCNA3P22001 575 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 EIF4BP23588 611 aaKnown RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 YY1P25490 414 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 MIPP30301 263 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 NAMPTP43490 491 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 CACNA2D1P54289 1103 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TMPRSS15P98073 1019 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TAP1Q03518 808 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 AP1B1Q10567 949 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 BST1Q10588 318 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TRPC3Q13507 836 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 SUPT20HL1Q3ZLR7 823 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 C1orf228Q6PIY5 440 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 CDR2LQ86X02 465 aaPredicted RBP11.88□□□□□ -0.51
SRP54-213ENST00000556994 SLC25A41Q8N5S1 370 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 SHKBP1Q8TBC3 707 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 FAF2Q96CS3 445 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 ACAP3Q96P50 834 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 NIF3L1Q9GZT8 377 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 TEX264Q9Y6I9 313 aa11.88□□□□□ -0.51
SRP54-213ENST00000556994 DCAF8L1A6NGE4 600 aa11.87□□□□□ -0.51
SRP54-213ENST00000556994 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms