RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 SCARA5Q6ZMJ2 495 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 ALLCQ8N6M5 410 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 FRMD1Q8N878 549 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 MDGA1Q8NFP4 955 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 SPATA17Q96L03 361 aa15.76■□□□□ 0.11
CHD8-211ENST00000556833 NXF1Q9UBU9 619 aaKnown RBP15.76■□□□□ 0.11
CHD8-211ENST00000556833 ATXN2Q99700 1313 aaKnown RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 CEP192Q8TEP8 1941 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 LNP1A1A4G5 178 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 BCLAF3A2AJT9 711 aaKnown RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 ZNF840PA6NDX5 716 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 TRIM66O15016 1216 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 KLF8O95600 359 aaPredicted RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 SPINK2P20155 84 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 CASP4P49662 377 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 TNNC1P63316 161 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 SNRNP35Q16560 246 aaKnown RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 UAP1L1Q3KQV9 507 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 WDR72Q3MJ13 1102 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 EMC10Q5UCC4 262 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 VSTM1Q6UX27 236 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 TMEM92Q6UXU6 159 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 STXBP4Q6ZWJ1 553 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 CYP2U1Q7Z449 544 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 LIMS2Q7Z4I7 341 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 WDR49Q8IV35 697 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 MYCBPAPQ8TBZ2 947 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 SPATA18Q8TC71 538 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 FNBP1Q96RU3 617 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 CGRRF1Q99675 332 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 LSM14BQ9BX40 385 aaKnown RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 BLZF1Q9H2G9 400 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 AGPAT3Q9NRZ7 376 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 CHD6Q8TD26 2715 aa15.75■□□□□ 0.11
CHD8-211ENST00000556833 TNRC6BQ9UPQ9 1833 aaKnown RBP15.75■□□□□ 0.11
CHD8-211ENST00000556833 TGFB1I1O43294 461 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 IRF1P10914 325 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 PTPN1P18031 435 aaKnown RBP15.74■□□□□ 0.11
CHD8-211ENST00000556833 MYL6P60660 151 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 CYP24A1Q07973 514 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 FOXC1Q12948 553 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 ORC1Q13415 861 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 DHCR24Q15392 516 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 MAPRE1Q15691 268 aaKnown RBP15.74■□□□□ 0.11
CHD8-211ENST00000556833 USP39Q53GS9 565 aaKnown RBP15.74■□□□□ 0.11
CHD8-211ENST00000556833 FAM26FQ5R3K3 315 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 TDRD10Q5VZ19 366 aaKnown RBP15.74■□□□□ 0.11
CHD8-211ENST00000556833 PMS2CLQ68D20 193 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 DPH6Q7L8W6 267 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 NAT16Q8N8M0 369 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 TXNDC5Q8NBS9 432 aaKnown RBP15.74■□□□□ 0.11
CHD8-211ENST00000556833 HMGB4Q8WW32 186 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 PIGKQ92643 395 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 MED10Q9BTT4 135 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 B3GNT5Q9BYG0 378 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 TRIM9Q9C026 710 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 TNMDQ9H2S6 317 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 SMYD3Q9H7B4 428 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 BCCIPQ9P287 314 aaKnown RBP eCLIP15.74■□□□□ 0.11
CHD8-211ENST00000556833 EBF1Q9UH73 591 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 MMP17Q9ULZ9 603 aa15.74■□□□□ 0.11
CHD8-211ENST00000556833 PI4KAP42356 2102 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 A8MXQ7 604 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 SGK1O00141 431 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 SPTLC2O15270 562 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 TOP3BO95985 862 aaKnown RBP15.73■□□□□ 0.11
CHD8-211ENST00000556833 PDE6CP51160 858 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 CDH8P55286 799 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 TRPC3Q13507 836 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 SURF1Q15526 300 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 E2F4Q16254 413 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 TMEFF1Q8IYR6 380 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 PGBD3Q8N328 593 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 DEFB119Q8N690 84 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 SCAMP5Q8TAC9 235 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 ZNF516Q92618 1163 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 FBXO32Q969P5 355 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 TTLL2Q9BWV7 592 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 FSCN3Q9NQT6 498 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.73■□□□□ 0.11
CHD8-211ENST00000556833 ASCC3Q8N3C0 2202 aaKnown RBP15.73■□□□□ 0.11
CHD8-211ENST00000556833 IGF2RP11717 2491 aa15.73■□□□□ 0.11
CHD8-211ENST00000556833 KHNYNO15037 678 aaKnown RBP15.72■□□□□ 0.11
CHD8-211ENST00000556833 KIAA0391O15091 583 aaKnown RBP15.72■□□□□ 0.11
CHD8-211ENST00000556833 EIF3DO15371 548 aaKnown RBP eCLIP15.72■□□□□ 0.11
CHD8-211ENST00000556833 STX6O43752 255 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 PHACTR2O75167 634 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 KAT7O95251 611 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 OAS1P00973 400 aaKnown RBP15.72■□□□□ 0.11
CHD8-211ENST00000556833 APODP05090 189 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 CENPBP07199 599 aaPredicted RBP15.72■□□□□ 0.11
CHD8-211ENST00000556833 ADH5P11766 374 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 TCF3P15923 654 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 WASP42768 502 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 NASPP49321 788 aaPredicted RBP15.72■□□□□ 0.11
CHD8-211ENST00000556833 SLC7A9P82251 487 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 ZNF252P-AS1Q0IIN9 211 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 BIRC3Q13489 604 aa15.72■□□□□ 0.11
CHD8-211ENST00000556833 PSMD6Q15008 389 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms