RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ZSWIM3Q96MP5 696 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 TTLL2Q9BWV7 592 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 STK33Q9BYT3 514 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 IFNKQ9P0W0 207 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 EPS15L1Q9UBC2 864 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 LIMD1Q9UGP4 676 aa18.48■□□□□ 0.55
SHMT2-225ENST00000556798 RTN3O95197 1032 aaPredicted RBP18.47■□□□□ 0.55
SHMT2-225ENST00000556798 ASGR2P07307 311 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 CFHP08603 1231 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 YWHAQP27348 245 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 JAM2P57087 298 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 BST2Q10589 180 aaKnown RBP18.47■□□□□ 0.55
SHMT2-225ENST00000556798 TAF10Q12962 218 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 STILQ15468 1287 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 CNGA2Q16280 664 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 PKDCCQ504Y2 493 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 PIGZQ86VD9 579 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 SLC47A2Q86VL8 602 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 PLCD3Q8N3E9 789 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 ZNF606Q8WXB4 792 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 SECISBP2LQ93073 1101 aaKnown RBP18.47■□□□□ 0.55
SHMT2-225ENST00000556798 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
SHMT2-225ENST00000556798 BDP1A6H8Y1 2624 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 XPO1O14980 1071 aaKnown RBP18.46■□□□□ 0.55
SHMT2-225ENST00000556798 GFPT2O94808 682 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 SLC8A3P57103 927 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 ARHGAP15Q53QZ3 475 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 TXNDC8Q6A555 127 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 DENND1BQ6P3S1 775 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 RNF135Q8IUD6 432 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 RSAD2Q8WXG1 361 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 MRPS31Q92665 395 aaKnown RBP18.46■□□□□ 0.55
SHMT2-225ENST00000556798 SPAG5Q96R06 1193 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 COL25A1Q9BXS0 654 aaPredicted RBP18.46■□□□□ 0.55
SHMT2-225ENST00000556798 TRPC7Q9HCX4 862 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 PNPLA8Q9NP80 782 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 GDE1Q9NZC3 331 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 EHD2Q9NZN4 543 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 GMIPQ9P107 970 aa18.46■□□□□ 0.55
SHMT2-225ENST00000556798 A0A1W2PQC6 194 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 MED7O43513 233 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 ABL1P00519 1130 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 SETSIPP0DME0 302 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 RGS7P49802 495 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 PTK2Q05397 1052 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 FAM78AQ5JUQ0 283 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 PARM1Q6UWI2 310 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 GAS2L3Q86XJ1 694 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 PASD1Q8IV76 773 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 MAB21L3Q8N8X9 362 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 ZSCAN18Q8TBC5 510 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-225ENST00000556798 FGF14Q92915 247 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 XPO4Q9C0E2 1151 aaKnown RBP18.45■□□□□ 0.54
SHMT2-225ENST00000556798 RBSNQ9H1K0 784 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 TASP1Q9H6P5 420 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 IL37Q9NZH6 218 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 TRPM5Q9NZQ8 1165 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 DAAM1Q9Y4D1 1078 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 ZFP37Q9Y6Q3 630 aaPredicted RBP18.45■□□□□ 0.54
SHMT2-225ENST00000556798 NUMBLQ9Y6R0 609 aa18.45■□□□□ 0.54
SHMT2-225ENST00000556798 C2orf78A6NCI8 922 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 PIK3R2O00459 728 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 SOX5P35711 763 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 PGFP49763 221 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 KIF11P52732 1056 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 HTR4Q13639 388 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 CACNA2D4Q7Z3S7 1137 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 ASB16Q96NS5 453 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 KXD1Q9BQD3 176 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 SLC46A2Q9BY10 475 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 SMG9Q9H0W8 520 aaKnown RBP18.44■□□□□ 0.54
SHMT2-225ENST00000556798 FBXO44Q9H4M3 255 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 KCNK12Q9HB15 430 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 CHORDC1Q9UHD1 332 aaPredicted RBP18.44■□□□□ 0.54
SHMT2-225ENST00000556798 MUTYHQ9UIF7 546 aa18.44■□□□□ 0.54
SHMT2-225ENST00000556798 KIF26AQ9ULI4 1882 aaPredicted RBP18.43■□□□□ 0.54
SHMT2-225ENST00000556798 FAM92AA1XBS5 289 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 ZNF840PA6NDX5 716 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 ANHXE9PGG2 379 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 USP17L7P0C7H9 530 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 CYP11B1P15538 503 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 FCARP24071 287 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 PBX1P40424 430 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 STAT1P42224 750 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 PDE6CP51160 858 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 TKTL1P51854 596 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 ADIGQ0VDE8 80 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 TAF3Q5VWG9 929 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 PMF1Q6P1K2 205 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 NOP9Q86U38 636 aaKnown RBP18.43■□□□□ 0.54
SHMT2-225ENST00000556798 SLC35F5Q8WV83 523 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 SMARCD2Q92925 531 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 SLC22A12Q96S37 553 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 RPP25Q9BUL9 199 aaKnown RBP18.43■□□□□ 0.54
SHMT2-225ENST00000556798 UBXN6Q9BZV1 441 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 SMOC2Q9H3U7 446 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 LRRC4Q9HBW1 653 aa18.43■□□□□ 0.54
SHMT2-225ENST00000556798 COMMD8Q9NX08 183 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms