RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 ASB14A6NK59 587 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 CPLX1O14810 134 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ATP2A1O14983 1001 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ZBTB5O15062 677 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 DTNBO60941 627 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PLEKHA8P1O95397 391 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 SNHG28P0DPA3 235 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PTX3P26022 381 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 LIFRP42702 1097 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 NOVP48745 357 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 METAP2P50579 478 aaKnown RBP eCLIP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 NEK4P51957 841 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 BPIFB4P59827 614 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PURAQ00577 322 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 DPTQ07507 201 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 TROAPQ12815 778 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 TRAF1Q13077 416 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ACVR2BQ13705 512 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ZNF174Q15697 407 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 GAGE13Q4V321 117 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PIK3R6Q5UE93 754 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 SEPT14Q6ZU15 432 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ARMCX2Q7L311 632 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 HEATR3Q7Z4Q2 680 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 BMP8AQ7Z5Y6 402 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 NOP9Q86U38 636 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 SRBD1Q8N5C6 995 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 ANKRD53Q8N9V6 530 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 TRPV1Q8NER1 839 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 CHFRQ96EP1 664 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PAWRQ96IZ0 340 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 RPL10LQ96L21 214 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 TAAR1Q96RJ0 339 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 LZTS2Q9BRK4 669 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 SENP6Q9GZR1 1112 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 UPF2Q9HAU5 1272 aaKnown RBP5.33□□□□□ -1.56
ATXN3-243ENST00000556671 CYP39A1Q9NYL5 469 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 PNMA2Q9UL42 364 aa5.33□□□□□ -1.56
ATXN3-243ENST00000556671 CCDC196A0A1B0GTZ2 297 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 KBTBD13C9JR72 458 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 GCOM1H8Y6P7 765 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 CBX4O00257 560 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 SNAI1O95863 264 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 PGK1P00558 417 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 HOXC6P09630 235 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 POLR2MP0CAP2 368 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 RARBP10826 455 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 ALDH5A1P51649 535 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 NAPAP54920 295 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 RPS6P62753 249 aaKnown RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 TNFAIP2Q03169 654 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 MYBPC3Q14896 1274 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 PRAMEF9Q5VWM5 478 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 APOA5Q6Q788 366 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 SLC30A10Q6XR72 485 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 GAREM2Q75VX8 874 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 NECAB2Q7Z6G3 386 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 CLEC14AQ86T13 490 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 ZNF483Q8TF39 744 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 MIEF2Q96C03 454 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 DYDC2Q96IM9 177 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 TUBGCP5Q96RT8 1024 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 RMDN3Q96TC7 470 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 SLC26A6Q9BXS9 759 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 SLKQ9H2G2 1235 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 ABHD16BQ9H3Z7 469 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 RIOX1Q9H6W3 641 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 MMRN2Q9H8L6 949 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 SPC25Q9HBM1 224 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 XPNPEP3Q9NQH7 507 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 PDGFCQ9NRA1 345 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 POLR3BQ9NW08 1133 aaPredicted RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 RBM28Q9NW13 759 aaKnown RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 PARPBPQ9NWS1 579 aa5.32□□□□□ -1.56
ATXN3-243ENST00000556671 DDX20Q9UHI6 824 aaKnown RBP5.32□□□□□ -1.56
ATXN3-243ENST00000556671 WDR19Q8NEZ3 1342 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 MYO9BQ13459 2157 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 SMCO2A6NFE2 343 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 PPP1R12AO14974 1030 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 SEPT4O43236 478 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 CYTH3O43739 400 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 RFPL3O75679 317 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 MYL3P08590 195 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 AKR1A1P14550 325 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 MAKP20794 623 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 ADCYAP1R1P41586 468 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 BCAR1P56945 870 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 BEX3Q00994 111 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 STXBP2Q15833 593 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 CDCA2Q69YH5 1023 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 IQSEC1Q6DN90 963 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 ESRP1Q6NXG1 681 aaKnown RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 CPLX2Q6PUV4 134 aaKnown RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 FAM111BQ6SJ93 734 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 RNF180Q86T96 592 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 FBXO16Q8IX29 292 aaPredicted RBP5.31□□□□□ -1.56
ATXN3-243ENST00000556671 NECAB1Q8N987 351 aa5.31□□□□□ -1.56
ATXN3-243ENST00000556671 FAM133AQ8N9E0 248 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms