RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 FAM129AQ9BZQ8 928 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 DPH5Q9H2P9 285 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 CHST7Q9NS84 486 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 SCN5AQ14524 2016 aa15.44■□□□□ 0.06
VPS33B-205ENST00000556096 CASTOR2A6NHX0 329 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 C3orf70A6NLC5 250 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 PIK3R2O00459 728 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TRUB2O95900 331 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 POMCP01189 267 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SYN1P17600 705 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 IL1R2P27930 398 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 MIPP30301 263 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 KCNJ1P48048 391 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SLC8A3P57103 927 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 PLCB3Q01970 1234 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 FAAP100Q0VG06 881 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 MBTPS1Q14703 1052 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TAZQ16635 292 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TRNP1Q6NT89 227 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 DRICH1Q6PGQ1 229 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 RTN4RL1Q86UN2 441 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SCUBE3Q8IX30 993 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 FUKQ8N0W3 1084 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 LRRC45Q96CN5 670 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 PIWIL1Q96J94 861 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 NEUROG2Q9H2A3 272 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 KLHL11Q9NVR0 708 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 DDX43Q9NXZ2 648 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 CACNG4Q9UBN1 327 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 USP18Q9UMW8 372 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 R3HDM2Q9Y2K5 976 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 LRRD1A4D1F6 860 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 ATP2C2O75185 946 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 DESP17661 470 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 KDELR1P24390 212 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TKTP29401 623 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 OAS2P29728 719 aaKnown RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 FLT3P36888 993 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 CCDC14Q49A88 953 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TIGD5Q53EQ6 642 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 HSP90B2PQ58FF3 399 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 PAQR9Q6ZVX9 377 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 KCTD13Q8WZ19 329 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 FTHL17Q9BXU8 183 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 PPP1R12CQ9BZL4 782 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 TRIM31Q9BZY9 425 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 ZWILCHQ9H900 591 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 ZDHHC18Q9NUE0 388 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 CDH9Q9ULB4 789 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-205ENST00000556096 SNX24Q9Y343 169 aa15.43■□□□□ 0.06
VPS33B-205ENST00000556096 GOLGA6BA6NDN3 693 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 DCDC2CA8MYV0 355 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 H3BQF6 201 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 GAS8O95995 478 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 CYP11A1P05108 521 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 ODC1P11926 461 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 KRT10P13645 584 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 SELPP16109 830 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 ACAT1P24752 427 aaKnown RBP15.42■□□□□ 0.06
VPS33B-205ENST00000556096 LMNB2Q03252 620 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 SNX1Q13596 522 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 KIAA0319Q5VV43 1072 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 CD300LGQ6UXG3 332 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 ANKRD33Q7Z3H0 272 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 IQCKQ8N0W5 287 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 FAM71BQ8TC56 605 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 ATG4AQ8WYN0 398 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 SYT15Q9BQS2 421 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 PAAF1Q9BRP4 392 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 HTATIP2Q9BUP3 242 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 GRHL1Q9NZI5 618 aa15.42■□□□□ 0.06
VPS33B-205ENST00000556096 ARHGEF37A1IGU5 675 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 M0QZQ0 153 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 AGPSO00116 658 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 HSF2BPO75031 334 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 GRAP2O75791 330 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 CLTBP09497 229 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 NPR3P17342 541 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 PCSK1P29120 753 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 SDC4P31431 198 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 PTPN9P43378 593 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 RPL21P46778 160 aaKnown RBP15.41■□□□□ 0.06
VPS33B-205ENST00000556096 KRT17Q04695 432 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 ADCY2Q08462 1091 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 BFSP2Q13515 415 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 PTK6Q13882 451 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 PPP1R7Q15435 360 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 TAF5Q15542 800 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 C1orf53Q5VUE5 145 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 DCLRE1AQ6PJP8 1040 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 ZDHHC24Q6UX98 284 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 LRRC8DQ7L1W4 858 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 FMO2Q99518 471 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 B3GNT5Q9BYG0 378 aa15.41■□□□□ 0.06
VPS33B-205ENST00000556096 FRMD8P1Q9BZ68 369 aaPredicted RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms