RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 OR6J1Q8NGC5 347 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 ZNF564Q8TBZ8 553 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SLC20A1Q8WUM9 679 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 KAT2BQ92831 832 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SEMA4DQ92854 862 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 COL26A1Q96A83 441 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 TMEM143Q96AN5 459 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 ZNF653Q96CK0 615 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SPATA33Q96N06 139 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 YME1L1Q96TA2 773 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 KRT12Q99456 494 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 ZSWIM1Q9BR11 485 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 PHF7Q9BWX1 381 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 CCDC113Q9H0I3 377 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SMOC2Q9H3U7 446 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 MRPL47Q9HD33 250 aaKnown RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 TIMMDC1Q9NPL8 285 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 PRMT7Q9NVM4 692 aaPredicted RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 DLL3Q9NYJ7 618 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 ERAP1Q9NZ08 941 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 PARP2Q9UGN5 583 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 DMGDHQ9UI17 866 aaKnown RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 CNTN6Q9UQ52 1028 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 UTP11Q9Y3A2 253 aaKnown RBP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.88□□□□□ -1.31
PSEN1-214ENST00000555867 NAV2Q8IVL1 2488 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 TTC3P53804 2025 aa6.88□□□□□ -1.31
PSEN1-214ENST00000555867 SDK1Q7Z5N4 2213 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 C5orf67F2Z3F1 127 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ACKR2O00590 384 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 DDX3YO15523 660 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CYP26A1O43174 497 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 SART1O43290 800 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 SPOPO43791 374 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 LSM8O95777 96 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 GH1P01241 217 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TNNC2P02585 160 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 AMHP03971 560 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CLTAP09496 248 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TXNP10599 105 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 KRT5P13647 590 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CHRNB2P17787 502 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 DNAJB1P25685 340 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TMOD1P28289 359 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CHRNA3P32297 505 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CTNNA1P35221 906 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CTNNB1P35222 781 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 BMPR1AP36894 532 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CETN2P41208 172 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NSFP46459 744 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NDUFV1P49821 464 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NLRP11P59045 1033 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NOP14P78316 857 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CDC42EP1Q00587 391 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 GUCY2DQ02846 1103 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CENPCQ03188 943 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 LAMTOR4Q0VGL1 99 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 PLCB4Q15147 1175 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 PCBP1Q15365 356 aaKnown RBP eCLIP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 FAM187BQ17R55 369 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CFAP58Q5T655 872 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TDRD10Q5VZ19 366 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 MPZL3Q6UWV2 235 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TSHZ1Q6ZSZ6 1077 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 SND1Q7KZF4 910 aaKnown RBP eCLIP6.87□□□□□ -1.312e-8■■■■□ 24.4
PSEN1-214ENST00000555867 ZNF771Q7L3S4 317 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CROCCP2Q86T23 111 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 SLC47A2Q86VL8 602 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NT5DC4Q86YG4 428 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CD302Q8IX05 232 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TTC39CQ8N584 583 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 RNF149Q8NC42 400 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ZSWIM2Q8NEG5 633 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 DDX1Q92499 740 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 SEC14L1Q92503 715 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TOP1MTQ969P6 601 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ANKRD36BP1Q96IX9 119 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 MS4A14Q96JA4 679 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ACO2Q99798 780 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 NUP85Q9BW27 656 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 TARS2Q9BW92 718 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 FAM117AQ9C073 453 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ZNF518BQ9C0D4 1074 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 KDM4CQ9H3R0 1056 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 EPB41L5Q9HCM4 733 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 OSGEPQ9NPF4 335 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ANKFY1Q9P2R3 1169 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 BARX2Q9UMQ3 279 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 PACSIN2Q9UNF0 486 aaPredicted RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CEP83Q9Y592 693 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 ALG6Q9Y672 507 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 PDCD11Q14690 1871 aaKnown RBP6.87□□□□□ -1.31
PSEN1-214ENST00000555867 CEP295Q9C0D2 2601 aa6.87□□□□□ -1.31
PSEN1-214ENST00000555867 FANCMQ8IYD8 2048 aa6.86□□□□□ -1.31
PSEN1-214ENST00000555867 IGF2RP11717 2491 aa6.86□□□□□ -1.31
PSEN1-214ENST00000555867 CNTNAP2Q9UHC6 1331 aa6.86□□□□□ -1.31
PSEN1-214ENST00000555867 H3BQF6 201 aa6.86□□□□□ -1.31
PSEN1-214ENST00000555867 PODXLO00592 558 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms