RNA–Protein interactions for RNA: ENST00000555752.1

SUPT16H-203, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 888 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-203ENST00000555752 GOLGA8IPA6NC78 632 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 ZNF840PA6NDX5 716 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 GOLGA8JA6NMD2 632 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 ABL1P00519 1130 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 CD59P13987 128 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 PCSK1P29120 753 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 LHX1P48742 406 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 SLC7A9P82251 487 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 RPL6Q02878 288 aaKnown RBP20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 GFPT1Q06210 699 aaPredicted RBP20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 DUOXA1Q1HG43 343 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 LMBRD2Q68DH5 695 aaPredicted RBP20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 DYMQ7RTS9 669 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 BRSK2Q8IWQ3 736 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 MINDY1Q8N5J2 469 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 TOP6BLQ8N6T0 577 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 KBTBD7Q8WVZ9 684 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 ERLEC1Q96DZ1 483 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 AK8Q96MA6 479 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 SYT15Q9BQS2 421 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 CAPN10Q9HC96 672 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 MAGEC2Q9UBF1 373 aaPredicted RBP20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 CELSR3Q9NYQ7 3312 aa20.28■□□□□ 0.84
SUPT16H-203ENST00000555752 OPHN1O60890 802 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 PPP1R37O75864 691 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 SERPINF2P08697 491 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 ABCD1P33897 745 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 GRIK1P39086 918 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 PDE6CP51160 858 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 SCAPQ12770 1279 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 SOWAHCQ53LP3 525 aaPredicted RBP20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 DENND5BQ6ZUT9 1274 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 PHTF2Q8N3S3 785 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 RASSF8Q8NHQ8 419 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 SPATA17Q96L03 361 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 MTMR12Q9C0I1 747 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 PDE11AQ9HCR9 933 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 RBAKQ9NYW8 714 aaPredicted RBP20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 TBC1D7Q9P0N9 293 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 ITGA11Q9UKX5 1188 aa20.27■□□□□ 0.84
SUPT16H-203ENST00000555752 A0A0A0MRY4 1105 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 H0Y626 953 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 TRIM16O95361 564 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 OLFM2O95897 454 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 PDGFRBP09619 1106 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 ADH5P11766 374 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 GABRG2P18507 467 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 GRIA2P42262 883 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 CYP27A1Q02318 531 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 POSTNQ15063 836 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 HSF5Q4G112 596 aaPredicted RBP20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 SPDYCQ5MJ68 293 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 C4orf50Q6ZRC1 276 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 NAT16Q8N8M0 369 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 PNPLA1Q8N8W4 532 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 NOC3LQ8WTT2 800 aaKnown RBP20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 CACTINQ8WUQ7 758 aaKnown RBP20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 LARP4BQ92615 738 aaKnown RBP20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 STRA6Q9BX79 667 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 CALCOCO1Q9P1Z2 691 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 HCN2Q9UL51 889 aa20.26■□□□□ 0.83
SUPT16H-203ENST00000555752 AP5Z1O43299 807 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 SLC26A4O43511 780 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 SH3BP5O60239 455 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 OAS1P00973 400 aaKnown RBP20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 HOXD12P35452 270 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 DDIT3P35638 169 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 EIF2DP41214 584 aaKnown RBP20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 WASP42768 502 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 CACNA2D1P54289 1103 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 RBP5P82980 135 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 ZNF33AQ06730 810 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 BYSLQ13895 437 aaKnown RBP20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 COL28A1Q2UY09 1125 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 LY6G5CQ5SRR4 150 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 VSTM1Q6UX27 236 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 PDZD3Q86UT5 571 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 MIB1Q86YT6 1006 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 SLC41A1Q8IVJ1 513 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 CEP76Q8TAP6 659 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 TTLL2Q9BWV7 592 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 TMEM30AQ9NV96 361 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 CDH9Q9ULB4 789 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 PTPRJQ12913 1337 aa20.25■□□□□ 0.83
SUPT16H-203ENST00000555752 PLXNB3Q9ULL4 1909 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 F8VP50 259 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 ARHGAP33O14559 1287 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 SLC9A3R1O14745 358 aaPredicted RBP20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 TRIM24O15164 1050 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 ADH1CP00326 375 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 PFKLP17858 780 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 RDXP35241 583 aaKnown RBP20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 DPP6P42658 865 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 TNFRSF4P43489 277 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 CASP5P51878 434 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 TAF10Q12962 218 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 ZNF423Q2M1K9 1284 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 LIMS2Q7Z4I7 341 aa20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 KRI1Q8N9T8 703 aaKnown RBP20.24■□□□□ 0.83
SUPT16H-203ENST00000555752 OR5B17Q8NGF7 314 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms