RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SHISA7A6NL88 538 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 PDGFRBP09619 1106 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 P4HA1P13674 534 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 PTPN1P18031 435 aaKnown RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 GDI1P31150 447 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 ASPAP45381 313 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 CYP27A1Q02318 531 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SGSM1Q2NKQ1 1148 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 FIGNQ5HY92 759 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 MDH1BQ5I0G3 518 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 WDR44Q5JSH3 913 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 TRIM65Q6PJ69 517 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SCARA5Q6ZMJ2 495 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 TPRG1Q6ZUI0 275 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SCN4BQ8IWT1 228 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 CMTM8Q8IZV2 173 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 DTWD2Q8NBA8 298 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SPC24Q8NBT2 197 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 B3GALNT2Q8NCR0 500 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 EHBP1Q8NDI1 1231 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 ZNF397Q8NF99 534 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 LSM14BQ9BX40 385 aaKnown RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SLC46A2Q9BY10 475 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 BCO2Q9BYV7 579 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 INTS2Q9H0H0 1204 aaKnown RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SDCBP2Q9H190 292 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 LTB4R2Q9NPC1 389 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 HEBP1Q9NRV9 189 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 FAM207AQ9NSI2 230 aaPredicted RBP10.22□□□□□ -0.77
ACTN1-215ENST00000555616 RAB20Q9NX57 234 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SIK3Q9Y2K2 1263 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 SIT1Q9Y3P8 196 aa10.22□□□□□ -0.77
ACTN1-215ENST00000555616 KIF26AQ9ULI4 1882 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 A8MXQ7 604 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 STK25O00506 426 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 ZNF263O14978 683 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TRIM66O15016 1216 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 CHADO15335 359 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 HLA-DRAP01903 254 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 PTMAP06454 111 aaKnown RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 SLC9A1P19634 815 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 BDNFP23560 247 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 PON1P27169 355 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 RAP1GAPP47736 663 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 MLLT6P55198 1093 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 CDH8P55286 799 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 GSDMDP57764 484 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 NOP14P78316 857 aaKnown RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 INCA1Q0VD86 236 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 KCNMA1Q12791 1236 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 ZNF268Q14587 947 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 ARHGAP29Q52LW3 1261 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 HS1BP3Q53T59 392 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 CACNA2D4Q7Z3S7 1137 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 ALYREFQ86V81 257 aaKnown RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 MON1AQ86VX9 555 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 CELF5Q8N6W0 485 aaKnown RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TAS1R2Q8TE23 839 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 MRPS31Q92665 395 aaKnown RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TRIM44Q96DX7 344 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 MSANTD3Q96H12 275 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TNIP3Q96KP6 325 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 C8orf48Q96LL4 319 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 FAM81BQ96LP2 452 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 NT5C1BQ96P26 610 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 LRRC3BQ96PB8 259 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TTLL2Q9BWV7 592 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 EDEM3Q9BZQ6 932 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 ZNF518BQ9C0D4 1074 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 NIF3L1Q9GZT8 377 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 KIF9Q9HAQ2 790 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 TMEM30AQ9NV96 361 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 APEX2Q9UBZ4 518 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 HMGXB4Q9UGU5 601 aa10.21□□□□□ -0.77
ACTN1-215ENST00000555616 MAGED2Q9UNF1 606 aaPredicted RBP10.21□□□□□ -0.77
ACTN1-215ENST00000555616 A0A1W2PQJ5 194 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 F8VP50 259 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 H0Y858 1186 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 MAN2B1O00754 1011 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 DPYSL4O14531 572 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 ATP8B3O60423 1300 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 LRRN2O75325 713 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 DCNP07585 359 aaKnown RBP10.2□□□□□ -0.78
ACTN1-215ENST00000555616 GLULP15104 373 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 PTPRDP23468 1912 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 TARSP26639 723 aaKnown RBP10.2□□□□□ -0.78
ACTN1-215ENST00000555616 ANXA13P27216 316 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 AVPR1AP37288 418 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 GRIK1P39086 918 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 MAGEA9P43362 315 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 KLK7P49862 253 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 CACNA2D1P54289 1103 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 USP46P62068 366 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 UBXN2BQ14CS0 331 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 ANGPT1Q15389 498 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 TSR1Q2NL82 804 aaKnown RBP10.2□□□□□ -0.78
ACTN1-215ENST00000555616 KLHDC7AQ5VTJ3 777 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 TXNDC8Q6A555 127 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 SPOPLQ6IQ16 392 aa10.2□□□□□ -0.78
ACTN1-215ENST00000555616 ZNF852Q6ZMS4 543 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms